RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 KCNA1Q09470 495 aa11.79□□□□□ -0.52
PTPMT1-204ENST00000527079 PPP2R5AQ15172 486 aa11.79□□□□□ -0.52
PTPMT1-204ENST00000527079 H2AFVQ71UI9 128 aa11.79□□□□□ -0.52
PTPMT1-204ENST00000527079 ZNF720Q7Z2F6 126 aa11.79□□□□□ -0.52
PTPMT1-204ENST00000527079 FAM160B2Q86V87 743 aa11.79□□□□□ -0.52
PTPMT1-204ENST00000527079 SYCE1Q8N0S2 351 aa11.79□□□□□ -0.52
PTPMT1-204ENST00000527079 NEK9Q8TD19 979 aa11.79□□□□□ -0.52
PTPMT1-204ENST00000527079 FAM151AQ8WW52 585 aa11.79□□□□□ -0.52
PTPMT1-204ENST00000527079 CALR3Q96L12 384 aaKnown RBP11.79□□□□□ -0.52
PTPMT1-204ENST00000527079 HINFPQ9BQA5 517 aa11.79□□□□□ -0.52
PTPMT1-204ENST00000527079 SPDYE2BA6NHP3 402 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 A6NNZ2 444 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 SPDYE6P0CI01 402 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 NMT1P30419 496 aaKnown RBP11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 NOP2P46087 812 aaKnown RBP11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 TUBB8Q3ZCM7 444 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 LRRC31Q6UY01 552 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 SLFN11Q7Z7L1 901 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 FAM178BQ8IXR5 827 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 ACER1Q8TDN7 264 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 WHAMMQ8TF30 809 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 FIZ1Q96SL8 496 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 KRT12Q99456 494 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 STK33Q9BYT3 514 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 TSPYL1Q9H0U9 437 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 EPB41L5Q9HCM4 733 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 DMAC2Q9NW81 257 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 ZNF219Q9P2Y4 722 aaPredicted RBP11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 ZBTB21Q9ULJ3 1066 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 PACSIN2Q9UNF0 486 aaPredicted RBP11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 FRMD4BQ9Y2L6 1034 aa11.78□□□□□ -0.52
PTPMT1-204ENST00000527079 SFI1A8K8P3 1242 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 KCNK3O14649 394 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 PPIP5K2O43314 1243 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 CHMP2AO43633 222 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 CCDC172P0C7W6 258 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 GUCY2CP25092 1073 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 FMO5P49326 533 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 DNA2P51530 1060 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 MRPS25P82663 173 aaKnown RBP11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 GUCY2DQ02846 1103 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 MYBPC2Q14324 1141 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 GRIPAP1Q4V328 841 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 KIAA1755Q5JYT7 1200 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 CCDC174Q6PII3 467 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 TSEN2Q8NCE0 465 aaKnown RBP11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 TPCN2Q8NHX9 752 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 ZNF577Q9BSK1 485 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 TEKT3Q9BXF9 490 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 DEFB129Q9H1M3 183 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 VCPKMTQ9H867 229 aa11.77□□□□□ -0.52
PTPMT1-204ENST00000527079 YDJCA8MPS7 323 aa11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 TCP10L2B9ZVM9 353 aa11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 TBC1D12O60347 775 aa11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 LMNB1P20700 586 aa11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 SOX5P35711 763 aa11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 CARSP49589 748 aaKnown RBP11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 B3GNT9Q6UX72 402 aa11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 SLC9A9Q8IVB4 645 aa11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 SCFD2Q8WU76 684 aa11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 RIT2Q99578 217 aa11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 BCAS3Q9H6U6 928 aa11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 SUCLA2Q9P2R7 463 aaPredicted RBP11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 FEM1BQ9UK73 627 aa11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 AJAP1Q9UKB5 411 aaPredicted RBP11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 NFU1Q9UMS0 254 aa11.77□□□□□ -0.53
PTPMT1-204ENST00000527079 F8VZ95 297 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 DDX3XO00571 662 aaKnown RBP eCLIP11.76□□□□□ -0.531e-7■■■■□ 21.2
PTPMT1-204ENST00000527079 PPFIA4O75335 1185 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 RFX1P22670 979 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 POLD1P28340 1107 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 CHRNA5P30532 468 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 ZC2HC1CQ53FD0 456 aaPredicted RBP11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 IQCKQ8N0W5 287 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 SLC30A5Q8TAD4 765 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 UNC45AQ9H3U1 944 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 POLD4Q9HCU8 107 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 AGPAT3Q9NRZ7 376 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 ZNF70Q9UC06 446 aaPredicted RBP11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 CCDC188H7C350 402 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 PGRMC1O00264 195 aaKnown RBP11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 EVI5O60447 810 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 BCRP11274 1271 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 CUL1Q13616 776 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 DLGAP5Q15398 846 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 ODR4Q5SWX8 454 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 CFAP58Q5T655 872 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 FKBP1CQ5VVH2 108 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 PEX26Q7Z412 305 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 CD302Q8IX05 232 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 C1orf131Q8NDD1 294 aaKnown RBP11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 TMEM174Q8WUU8 243 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 CASKIN2Q8WXE0 1202 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 IFT81Q8WYA0 676 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.76□□□□□ -0.537e-16■□□□□ 10.3
PTPMT1-204ENST00000527079 STRA6Q9BX79 667 aa11.76□□□□□ -0.53
PTPMT1-204ENST00000527079 ARHGEF35A5YM69 484 aa11.75□□□□□ -0.53
PTPMT1-204ENST00000527079 IPO5O00410 1097 aaKnown RBP11.75□□□□□ -0.53
PTPMT1-204ENST00000527079 ZBTB39O15060 712 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms