RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 SURF1Q15526 300 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 ABCB5Q2M3G0 1257 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 EMC4Q5J8M3 183 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 IQSEC1Q6DN90 963 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 CXorf57Q6NSI4 855 aaKnown RBP5.97□□□□□ -1.45
CSDE1-211ENST00000525970 C16orf59Q7L2K0 433 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 ARRDC4Q8NCT1 418 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 DVL3Q92997 716 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-211ENST00000525970 FUBP3Q96I24 572 aaKnown RBP eCLIP5.97□□□□□ -1.45
CSDE1-211ENST00000525970 GPR101Q96P66 508 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-211ENST00000525970 SSBP3Q9BWW4 388 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-211ENST00000525970 CABP5Q9NP86 173 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 CHST12Q9NRB3 414 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 CATSPERZQ9NTU4 200 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 THG1LQ9NWX6 298 aaKnown RBP5.97□□□□□ -1.45
CSDE1-211ENST00000525970 NUB1Q9Y5A7 615 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 TCRBV5S2A0A599 114 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 NKRFO15226 690 aaKnown RBP eCLIP5.96□□□□□ -1.46
CSDE1-211ENST00000525970 TGM5O43548 720 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 KRT18P05783 430 aaKnown RBP5.96□□□□□ -1.46
CSDE1-211ENST00000525970 MYL1P05976 194 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 IARSP41252 1262 aaKnown RBP5.96□□□□□ -1.46
CSDE1-211ENST00000525970 STAT5AP42229 794 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 LACTBP83111 547 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-211ENST00000525970 OCRLQ01968 901 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 KLF1Q13351 362 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-211ENST00000525970 PTPN21Q16825 1174 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 TMEM240Q5SV17 173 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 GLB1LQ6UWU2 654 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 PLEKHH3Q7Z736 793 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 TRIM48Q8IWZ4 208 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 RBM12BQ8IXT5 1001 aaKnown RBP5.96□□□□□ -1.46
CSDE1-211ENST00000525970 FAM26EQ8N5C1 309 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 CLRN3Q8NCR9 226 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 CHST13Q8NET6 341 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 PHOSPHO1Q8TCT1 267 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 FBXW5Q969U6 566 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 LCORQ96JN0 433 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-211ENST00000525970 SRRDQ9UH36 339 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 DSEQ9UL01 958 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 NOB1Q9ULX3 412 aaKnown RBP5.96□□□□□ -1.46
CSDE1-211ENST00000525970 ZKSCAN5Q9Y2L8 839 aa5.96□□□□□ -1.46
CSDE1-211ENST00000525970 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-211ENST00000525970 PTPDC1A2A3K4 754 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 CCDC66A2RUB6 948 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 GSTA4O15217 222 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 DNM2P50570 870 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 SESN3P58005 492 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 NKX3-2P78367 333 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 GRIN1Q05586 938 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 GFOD2Q3B7J2 385 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 FAM47CQ5HY64 1035 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 MCTP2Q6DN12 878 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 CYP4F22Q6NT55 531 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 EP400NLQ6ZTU2 488 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 DGKHQ86XP1 1220 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 TXNDC5Q8NBS9 432 aaKnown RBP5.95□□□□□ -1.46
CSDE1-211ENST00000525970 TOE1Q96GM8 510 aaKnown RBP5.95□□□□□ -1.46
CSDE1-211ENST00000525970 OXSMQ9NWU1 459 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 H2AFY2Q9P0M6 372 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-211ENST00000525970 ASH2LQ9UBL3 628 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 CBLCQ9ULV8 474 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 ZNF536O15090 1300 aa5.95□□□□□ -1.46
CSDE1-211ENST00000525970 GOLGA6CA6NDK9 693 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 GOLGA6BA6NDN3 693 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 DDX3XO00571 662 aaKnown RBP eCLIP5.94□□□□□ -1.466e-27■■■□□ 18.1
CSDE1-211ENST00000525970 GOLGA6DP0CG33 693 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 ZBTB48P10074 688 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-211ENST00000525970 RBP3P10745 1247 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 KRT15P19012 456 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 KPNA1P52294 538 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-211ENST00000525970 CRY1Q16526 586 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 ARHGAP44Q17R89 818 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 STK32CQ86UX6 486 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 CPA6Q8N4T0 437 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 SAMD3Q8N6K7 520 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 EFHBQ8N7U6 833 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 C1orf162Q8NEQ5 155 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-211ENST00000525970 FBXO41Q8TF61 875 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 CLEC4DQ8WXI8 215 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 SLC5A5Q92911 643 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 AHCYL2Q96HN2 611 aaKnown RBP5.94□□□□□ -1.46
CSDE1-211ENST00000525970 OBP2AQ9NY56 170 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 GOLGA6AQ9NYA3 693 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 DTLQ9NZJ0 730 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 IP6K2Q9UHH9 426 aa5.94□□□□□ -1.46
CSDE1-211ENST00000525970 PNMA8BQ9ULN7 279 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-211ENST00000525970 LUC7L2Q9Y383 392 aaKnown RBP5.94□□□□□ -1.46
CSDE1-211ENST00000525970 TRIM75PA6NK02 468 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 ZNF561-AS1K7EIQ3 104 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 LAMTOR5O43504 91 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 PLIN1O60240 522 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 LTFP02788 710 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 MYBL2P10244 700 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 PDE6AP16499 860 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 ZNF28P17035 718 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 TUSC3Q13454 348 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 PCBP2Q15366 365 aaKnown RBP eCLIP5.93□□□□□ -1.46
CSDE1-211ENST00000525970 ARHGAP36Q6ZRI8 547 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 C11orf74Q86VG3 221 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms