RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 MPRIPQ6WCQ1 1025 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 LBX2Q6XYB7 198 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 BICDL1Q6ZP65 573 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.06□□□□□ -1.6
CD44-213ENST00000525209 TRMT2AQ8IZ69 625 aaKnown RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 TSPYL6Q8N831 410 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 SSH1Q8WYL5 1049 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 GTPBP3Q969Y2 492 aaKnown RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 CEP95Q96GE4 821 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 MAELQ96JY0 434 aaKnown RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 C7orf26Q96N11 449 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 SLX1AQ9BQ83 275 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 GPATCH1Q9BRR8 931 aaKnown RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 PI4K2AQ9BTU6 479 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 SORBS1Q9BX66 1292 aaKnown RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 ARHGAP39Q9C0H5 1083 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 FAM86C1Q9NVL1 165 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 ZSWIM5Q9P217 1185 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 TBC1D29Q9UFV1 150 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 GTF3C4Q9UKN8 822 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 C19orf53Q9UNZ5 99 aaPredicted RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 CORO2BQ9UQ03 480 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 DAGLAQ9Y4D2 1042 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 PLOD2O00469 737 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 MPHOSPH10O00566 681 aaKnown RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 TGM5O43548 720 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 SASH3O75995 380 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 SGPL1O95470 568 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 B3GALT4O96024 378 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 SLC4A1P02730 911 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 ADRB2P07550 413 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 MYF5P13349 255 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 P4HA1P13674 534 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 HNRNPLP14866 589 aaKnown RBP eCLIP5.05□□□□□ -1.6
CD44-213ENST00000525209 C5AR1P21730 350 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 HTR1BP28222 390 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 ACTN2P35609 894 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 ANP32AP39687 249 aaKnown RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 SSR1P43307 286 aaKnown RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 HSPA7P48741 367 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 ALDH9A1P49189 494 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 MECP2P51608 486 aaKnown RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 GFRA1P56159 465 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 GUCY1A3Q02108 690 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 NRG1Q02297 640 aaPredicted RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 CUL4AQ13619 759 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 BECN1Q14457 450 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 SNX17Q15036 470 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 PFKFB4Q16877 469 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 SETMARQ53H47 684 aaPredicted RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 CREB3L3Q68CJ9 461 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 HAUS3Q68CZ6 603 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 STYK1Q6J9G0 422 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 JMJD6Q6NYC1 403 aaPredicted RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 CNSTQ6PJW8 725 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 USP51Q70EK9 711 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 NLRP14Q86W24 1093 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 TRIM59Q8IWR1 403 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 CRACR2BQ8N4Y2 399 aaPredicted RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 EFHBQ8N7U6 833 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 ATG16L2Q8NAA4 619 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 CHST14Q8NCH0 376 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 ASAP3Q8TDY4 903 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 ADAMTS15Q8TE58 950 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 FNIP1Q8TF40 1166 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 STON2Q8WXE9 905 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 HTRA1Q92743 480 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 RRP36Q96EU6 259 aaKnown RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 PNMA5Q96PV4 448 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 ORAI2Q96SN7 254 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 C22orf23Q9BZE7 217 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 TRIM6Q9C030 488 aaPredicted RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 VPS33BQ9H267 617 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 RANBP17Q9H2T7 1088 aaKnown RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 CLEC4MQ9H2X3 399 aaPredicted RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 CNTD2Q9H8S5 307 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 GRPEL1Q9HAV7 217 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 SPON1Q9HCB6 807 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 GPAMQ9HCL2 828 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 XAB2Q9HCS7 855 aaKnown RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 PREBQ9HCU5 417 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 CACNA2D2Q9NY47 1150 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 VPS28Q9UK41 221 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 ITGB1BP2Q9UKP3 347 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 AGTPBP1Q9UPW5 1226 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 KCNH4Q9UQ05 1017 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 SIK3Q9Y2K2 1263 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 EMC9Q9Y3B6 208 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 DYRK1BQ9Y463 629 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 TACC3Q9Y6A5 838 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 DCAF1Q9Y4B6 1507 aa5.05□□□□□ -1.6
CD44-213ENST00000525209 BAZ1BQ9UIG0 1483 aaKnown RBP5.05□□□□□ -1.6
CD44-213ENST00000525209 PI4KAP2A4QPH2 592 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 GOLGA6L3A6NEY3 463 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 CHURC1-FNTBB4DL54 471 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 PES1O00541 588 aaKnown RBP5.04□□□□□ -1.6
CD44-213ENST00000525209 DAPK3O43293 454 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 COBLO75128 1261 aa5.04□□□□□ -1.6
CD44-213ENST00000525209 ARHGEF15O94989 841 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms