RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 ATE1O95260 518 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 CST3P01034 146 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-209ENST00000525132 GBP2P32456 591 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-209ENST00000525132 LTBRP36941 435 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 EIF4A3P38919 411 aaKnown RBP4.23□□□□□ -1.73
CSDE1-209ENST00000525132 FAM160A1Q05DH4 1040 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 PPIGQ13427 754 aaKnown RBP eCLIP4.23□□□□□ -1.73
CSDE1-209ENST00000525132 NFKBIBQ15653 356 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 ZNF394Q53GI3 561 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 SNRNP48Q6IEG0 339 aaKnown RBP4.23□□□□□ -1.73
CSDE1-209ENST00000525132 C22orf34Q6ZV56 151 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 ARMCX6Q7L4S7 300 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 OTOP2Q7RTS6 562 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 SLITRK4Q8IW52 837 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 GOLM1Q8NBJ4 401 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 SLC44A5Q8NCS7 719 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 SUPT20HQ8NEM7 779 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 DNAJB8Q8NHS0 232 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 PPP1R13LQ8WUF5 828 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 IP6K1Q92551 441 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 HEXIM2Q96MH2 286 aaKnown RBP4.23□□□□□ -1.73
CSDE1-209ENST00000525132 NT5C1AQ9BXI3 368 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 RTFDC1Q9BY42 306 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-209ENST00000525132 EHMT1Q9H9B1 1298 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 DBNDD1Q9H9R9 158 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 PIDD1Q9HB75 910 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 GGT7Q9UJ14 662 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 ZNF281Q9Y2X9 895 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 CORINQ9Y5Q5 1042 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 SVILO95425 2214 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 NUP155O75694 1391 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 RTL9Q8NET4 1388 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 ANKHD1Q8IWZ3 2542 aaKnown RBP4.23□□□□□ -1.73
CSDE1-209ENST00000525132 HIVEP1P15822 2718 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 A0A1B0GUL7 405 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 MEIS3P2A8K0S8 358 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 WDR64B1ANS9 1081 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 PDHXO00330 501 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 TIMP1P01033 207 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 CETPP11597 493 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 AOC1P19801 751 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 OXCT1P55809 520 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 DLX2Q07687 328 aaPredicted RBP4.22□□□□□ -1.73
CSDE1-209ENST00000525132 CACNB2Q08289 660 aaPredicted RBP4.22□□□□□ -1.73
CSDE1-209ENST00000525132 GJC2Q5T442 439 aaPredicted RBP4.22□□□□□ -1.73
CSDE1-209ENST00000525132 NBPF6Q5VWK0 638 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 MFSD5Q6N075 450 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 PSRC1Q6PGN9 363 aaPredicted RBP4.22□□□□□ -1.73
CSDE1-209ENST00000525132 PCSK4Q6UW60 755 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 ZNF574Q6ZN55 896 aaPredicted RBP4.22□□□□□ -1.73
CSDE1-209ENST00000525132 RELL1Q8IUW5 271 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 HID1Q8IV36 788 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 MCATQ8IVS2 390 aaKnown RBP4.22□□□□□ -1.73
CSDE1-209ENST00000525132 KCT2Q8NC54 265 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 ZNF507Q8TCN5 953 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 RASGRP4Q8TDF6 673 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 ELMO3Q96BJ8 720 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 NBPF4Q96M43 638 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 TBC1D32Q96NH3 1257 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 METTL22Q9BUU2 404 aaPredicted RBP4.22□□□□□ -1.73
CSDE1-209ENST00000525132 TNKS2Q9H2K2 1166 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 MKNK2Q9HBH9 465 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 KLK13Q9UKR3 277 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 MSRB2Q9Y3D2 182 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 NEUROG3Q9Y4Z2 214 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 FANCMQ8IYD8 2048 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 RGPD2P0DJD1 1756 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 CELSR2Q9HCU4 2923 aa4.22□□□□□ -1.73
CSDE1-209ENST00000525132 MGAQ8IWI9 3026 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 PRAMEF27A3QJZ7 478 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 HYAL3O43820 417 aaPredicted RBP4.21□□□□□ -1.74
CSDE1-209ENST00000525132 HTR3BO95264 441 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 FGBP02675 491 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 FAM87AP0C7U9 286 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 MYF5P13349 255 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 TXKP42681 527 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 NBPF12Q5TAG4 269 aaPredicted RBP4.21□□□□□ -1.74
CSDE1-209ENST00000525132 KIAA1211LQ6NV74 962 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 DPH6Q7L8W6 267 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 FMNL3Q8IVF7 1028 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 SLFN12Q8IYM2 578 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 REXO1Q8N1G1 1221 aaKnown RBP4.21□□□□□ -1.74
CSDE1-209ENST00000525132 RNF34Q969K3 372 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 FERMT2Q96AC1 680 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 COA7Q96BR5 231 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 VWCEQ96DN2 955 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 RPGRIP1Q96KN7 1286 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 UBP1Q9NZI7 540 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 PLAGL2Q9UPG8 496 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 SMG5Q9UPR3 1016 aaKnown RBP4.21□□□□□ -1.74
CSDE1-209ENST00000525132 MAN2B2Q9Y2E5 1009 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 SUPT16HQ9Y5B9 1047 aaKnown RBP4.21□□□□□ -1.74
CSDE1-209ENST00000525132 PCDHGB7Q9Y5F8 929 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 SLC4A7Q9Y6M7 1214 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 RYR3Q15413 4870 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 VPS8Q8N3P4 1428 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 FRMPD4Q14CM0 1322 aa4.21□□□□□ -1.74
CSDE1-209ENST00000525132 DUOX1Q9NRD9 1551 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 RPAP1Q9BWH6 1393 aaPredicted RBP4.2□□□□□ -1.74
CSDE1-209ENST00000525132 MINDY4BA8MYZ0 360 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms