RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 LIG3P49916 1009 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 TNFAIP2Q03169 654 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 GDF6Q6KF10 455 aaPredicted RBP8.21□□□□□ -1.1
CASP4-205ENST00000525116 KANK3Q6NY19 840 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 SIRT2Q8IXJ6 389 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 RPAP2Q8IXW5 612 aaPredicted RBP8.21□□□□□ -1.1
CASP4-205ENST00000525116 ZNF444Q8N0Y2 327 aaPredicted RBP8.21□□□□□ -1.1
CASP4-205ENST00000525116 LRRC47Q8N1G4 583 aaKnown RBP8.21□□□□□ -1.1
CASP4-205ENST00000525116 HERVK_113Q902F9 699 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 FGD4Q96M96 766 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 STRBPQ96SI9 672 aaKnown RBP8.21□□□□□ -1.1
CASP4-205ENST00000525116 TRIM56Q9BRZ2 755 aaKnown RBP8.21□□□□□ -1.1
CASP4-205ENST00000525116 SPON2Q9BUD6 331 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 AP5M1Q9H0R1 490 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 UPF3AQ9H1J1 476 aaKnown RBP8.21□□□□□ -1.1
CASP4-205ENST00000525116 HIPK3Q9H422 1215 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 SLC38A10Q9HBR0 1119 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 JPH1Q9HDC5 661 aaPredicted RBP8.21□□□□□ -1.1
CASP4-205ENST00000525116 NYAP2Q9P242 653 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 ARPP21Q9UBL0 812 aaPredicted RBP8.21□□□□□ -1.1
CASP4-205ENST00000525116 FEM1BQ9UK73 627 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 SOX13Q9UN79 622 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 ZBED9Q6R2W3 1325 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 GSG1L2A8MUP6 293 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 RFXAPO00287 272 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 ENC1O14682 589 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 ATP2A1O14983 1001 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 DYNC1LI2O43237 492 aaPredicted RBP8.2□□□□□ -1.1
CASP4-205ENST00000525116 SMARCA5O60264 1052 aaPredicted RBP8.2□□□□□ -1.1
CASP4-205ENST00000525116 EIF4EBP3O60516 100 aaPredicted RBP8.2□□□□□ -1.1
CASP4-205ENST00000525116 APPP05067 770 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 EPXP11678 715 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 SNAP25P60880 206 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 PSMC6P62333 389 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 TFF2Q03403 129 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 NFX1Q12986 1120 aaKnown RBP8.2□□□□□ -1.1
CASP4-205ENST00000525116 IKQ13123 557 aaPredicted RBP8.2□□□□□ -1.1
CASP4-205ENST00000525116 ITGA7Q13683 1181 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 RNFT1Q5M7Z0 435 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 TMEM63BQ5T3F8 832 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 SLFN13Q68D06 897 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 TTBK2Q6IQ55 1244 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 EEPD1Q7L9B9 569 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 CHST13Q8NET6 341 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 NUDT8Q8WV74 236 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 SCLYQ96I15 445 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 KATNBL1Q9H079 304 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 MTIF3Q9H2K0 278 aaKnown RBP8.2□□□□□ -1.1
CASP4-205ENST00000525116 PDGFCQ9NRA1 345 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 FBXO40Q9UH90 709 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 SLC4A7Q9Y6M7 1214 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 ASTN1O14525 1302 aa8.2□□□□□ -1.1
CASP4-205ENST00000525116 TRANK1O15050 2925 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 TMEM232C9JQI7 657 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 B3GALT4O96024 378 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 BMP3P12645 472 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 ALAS1P13196 640 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 TDO2P48775 406 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 RPS26P62854 115 aaKnown RBP8.19□□□□□ -1.1
CASP4-205ENST00000525116 ARID5AQ03989 594 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 IKBKEQ14164 716 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 FSCN1Q16658 493 aaKnown RBP8.19□□□□□ -1.1
CASP4-205ENST00000525116 SBK1Q52WX2 424 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 FAM117BQ6P1L5 589 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 TLK2Q86UE8 772 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 UBXN4Q92575 508 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 MKL1Q969V6 931 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 GPRASP2Q96D09 838 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 FAM122AQ96E09 287 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 SPATA32Q96LK8 384 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 ACAD9Q9H845 621 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 CERS4Q9HA82 394 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 RNF146Q9NTX7 359 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 GRIN2DO15399 1336 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 MCM3APO60318 1980 aa8.19□□□□□ -1.1
CASP4-205ENST00000525116 GBF1Q92538 1859 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 IGKV6D-41A0A0C4DH26 115 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 ASB14A6NK59 587 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 H3BRJ5 948 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 ZEB2O60315 1214 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 B4GALT4O60513 344 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 LILRB5O75023 590 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 CABYRO75952 493 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 TTLL1O95922 423 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 ATP2A2P16615 1042 aaKnown RBP8.18□□□□□ -1.1
CASP4-205ENST00000525116 MCCP23508 829 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 DNAJA1P31689 397 aaKnown RBP8.18□□□□□ -1.1
CASP4-205ENST00000525116 EIF4A3P38919 411 aaKnown RBP8.18□□□□□ -1.1
CASP4-205ENST00000525116 KCNQ1P51787 676 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 OAZ1P54368 228 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 PAK2Q13177 524 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 SNAP47Q5SQN1 464 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 TSHZ3Q63HK5 1081 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 PCNX4Q63HM2 1172 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 VN1R5Q7Z5H4 357 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 DEFB128Q7Z7B8 93 aa8.18□□□□□ -1.1
CASP4-205ENST00000525116 FBXO16Q8IX29 292 aaPredicted RBP8.18□□□□□ -1.1
CASP4-205ENST00000525116 RPUSD2Q8IZ73 545 aaKnown RBP8.18□□□□□ -1.1
CASP4-205ENST00000525116 FAM133AQ8N9E0 248 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms