RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SLC52A2Q9HAB3 445 aa2.75□□□□□ -1.97
CD44-212ENST00000524922 PFDN2Q9UHV9 154 aa2.75□□□□□ -1.97
CD44-212ENST00000524922 MRPS23Q9Y3D9 190 aaKnown RBP2.75□□□□□ -1.97
CD44-212ENST00000524922 R3HCC1Q9Y3T6 440 aaKnown RBP2.75□□□□□ -1.97
CD44-212ENST00000524922 B3GALT1Q9Y5Z6 326 aa2.75□□□□□ -1.97
CD44-212ENST00000524922 FGD5Q6ZNL6 1462 aa2.75□□□□□ -1.97
CD44-212ENST00000524922 TDRD9Q8NDG6 1382 aaKnown RBP2.74□□□□□ -1.97
CD44-212ENST00000524922 MAGI3Q5TCQ9 1506 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 GOLGA6L22H0YM25 854 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 CDC14BO60729 498 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 RASGRP1O95267 797 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 HMGCRP04035 888 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 SRGAP2CP0DJJ0 459 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 ZBTB48P10074 688 aaPredicted RBP2.74□□□□□ -1.97
CD44-212ENST00000524922 KRT15P19012 456 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 KRT4P19013 534 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 SDHAP31040 664 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 MRE11P49959 708 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 KCNQ1P51787 676 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 GUCY1A3Q02108 690 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 PTH1RQ03431 593 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 COL10A1Q03692 680 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 SSRP1Q08945 709 aaKnown RBP2.74□□□□□ -1.97
CD44-212ENST00000524922 KRTAP15-1Q3LI76 137 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 WDR72Q3MJ13 1102 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 MTERF2Q49AM1 385 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 NBPF6Q5VWK0 638 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 USP30Q70CQ3 517 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 DPH6Q7L8W6 267 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 MTDHQ86UE4 582 aaKnown RBP2.74□□□□□ -1.97
CD44-212ENST00000524922 RTN4RL1Q86UN2 441 aaPredicted RBP2.74□□□□□ -1.97
CD44-212ENST00000524922 NBPF4Q96M43 638 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 DHRS4Q9BTZ2 278 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 CELF4Q9BZC1 486 aaKnown RBP2.74□□□□□ -1.97
CD44-212ENST00000524922 OR10A2Q9H208 303 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 IKZF4Q9H2S9 585 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 CATSPERZQ9NTU4 200 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 UCKL1Q9NWZ5 548 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 PLA2G3Q9NZ20 509 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 ARHGAP28Q9P2N2 729 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 FBXO10Q9UK96 956 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 CDC42EP3Q9UKI2 254 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 NR2E1Q9Y466 385 aa2.74□□□□□ -1.97
CD44-212ENST00000524922 CTDP1Q9Y5B0 961 aaPredicted RBP2.74□□□□□ -1.97
CD44-212ENST00000524922 A0A0G2JNJ9 132 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 KRTAP23-1A1A580 65 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 PRAMEF25A6NGN4 478 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 ZNF202O95125 648 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 MSX2P35548 267 aaPredicted RBP2.73□□□□□ -1.97
CD44-212ENST00000524922 RPS19P39019 145 aaKnown RBP2.73□□□□□ -1.97
CD44-212ENST00000524922 MECP2P51608 486 aaKnown RBP2.73□□□□□ -1.97
CD44-212ENST00000524922 SLC25A3Q00325 362 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 DPTQ07507 201 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 RBL2Q08999 1139 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 MOGSQ13724 837 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 FHL2Q14192 279 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 NRN1LQ496H8 165 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 HS1BP3Q53T59 392 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 OTOP1Q7RTM1 612 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 FGD2Q7Z6J4 655 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 FILIP1Q7Z7B0 1213 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 LDLRAD3Q86YD5 345 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 CISD2Q8N5K1 135 aaKnown RBP2.73□□□□□ -1.97
CD44-212ENST00000524922 CHFRQ96EP1 664 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 OR14A2Q96R54 314 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 TRIM39Q9HCM9 518 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 Q9UFV3 132 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 COQ6Q9Y2Z9 468 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 WRNQ14191 1432 aaPredicted RBP eCLIP2.73□□□□□ -1.97
CD44-212ENST00000524922 PRG4Q92954 1404 aaPredicted RBP2.73□□□□□ -1.97
CD44-212ENST00000524922 RUSC2Q8N2Y8 1516 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 ARAP3Q8WWN8 1544 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 KDM5BQ9UGL1 1544 aa2.73□□□□□ -1.97
CD44-212ENST00000524922 RAD54L2Q9Y4B4 1467 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 TCRBV16S1A1N1A0A5B0 115 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 DVL2O14641 736 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 SLC26A4O43511 780 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 PCF11O94913 1555 aaKnown RBP2.72□□□□□ -1.97
CD44-212ENST00000524922 DNM2P50570 870 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 STAT5BP51692 787 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 ADCY7P51828 1080 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 PURAQ00577 322 aaKnown RBP2.72□□□□□ -1.97
CD44-212ENST00000524922 CRY1Q16526 586 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 LSM12Q3MHD2 195 aaKnown RBP2.72□□□□□ -1.97
CD44-212ENST00000524922 NAALADL2Q58DX5 795 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 USP51Q70EK9 711 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 ZNF627Q7L945 461 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 LRP10Q7Z4F1 713 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 C1orf210Q8IVY1 113 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 CKAP2LQ8IYA6 745 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 OR14K1Q8NGZ2 314 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 LARP4BQ92615 738 aaKnown RBP2.72□□□□□ -1.97
CD44-212ENST00000524922 NKD2Q969F2 451 aaPredicted RBP2.72□□□□□ -1.97
CD44-212ENST00000524922 GBP4Q96PP9 640 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 TRIM55Q9BYV6 548 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 HAPLN2Q9GZV7 340 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 TLR9Q9NR96 1032 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 KCNH7Q9NS40 1196 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 SIRPGQ9P1W8 387 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 SH3BP1Q9Y3L3 701 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms