RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 GINS2Q9Y248 185 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 CHD7Q9P2D1 2997 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 TRIM29Q14134 588 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 KIZQ2M2Z5 673 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 EPC2Q52LR7 807 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 XKR3Q5GH77 459 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 ODR4Q5SWX8 454 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 FAM43BQ6ZT52 329 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 NPAS4Q8IUM7 802 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 TMEM192Q8IY95 271 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 FIBCD1Q8N539 461 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 BANK1Q8NDB2 785 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 ZNF689Q96CS4 500 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 ZSCAN31Q96LW9 406 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 CEP89Q96ST8 783 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 MAP7D2Q96T17 732 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 ADGRA3Q8IWK6 1321 aa12.56□□□□□ -0.4
TRAPPC4-204ENST00000524797 TRANK1O15050 2925 aa12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 TMEM150BA6NC51 233 aa12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 BTBD18B2RXH4 712 aa12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 MGEA5O60502 916 aa12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 TMOD1P28289 359 aa12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 PSMC5P62195 406 aa12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 NFX1Q12986 1120 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 MTERF2Q49AM1 385 aa12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 FAM228AQ86W67 206 aa12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 DIS3L2Q8IYB7 885 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 CRIPAKQ8N1N5 446 aa12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 LLPHQ9BRT6 129 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 ADAMTS10Q9H324 1103 aa12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 ST3GAL5Q9UNP4 418 aa12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 AKT3Q9Y243 479 aa12.55□□□□□ -0.4
TRAPPC4-204ENST00000524797 DDX11L8A8MPP1 907 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 GPR182O15218 404 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 DGKIO75912 1065 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 LINC00271P0C7V0 271 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 SARSP49591 514 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 RBM25P49756 843 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 NLRP11P59045 1033 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 TBC1D8BQ0IIM8 1120 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 TJAP1Q5JTD0 557 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 MARCH6O60337 910 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 BAG4O95429 457 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 STAG3L1P0CL83 205 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 GPM6BQ13491 265 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 DSC3Q14574 896 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 EPHA7Q15375 998 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 SKIV2LQ15477 1246 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 CMTR2Q8IYT2 770 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 ZNF710Q8N1W2 664 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 RGS18Q9NS28 235 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 C1orf112Q9NSG2 853 aa12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 TCF20Q9UGU0 1960 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-204ENST00000524797 IGKV6-21A0A0C4DH24 114 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 H3BNC9 293 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 WNT7AO00755 349 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 DKC1O60832 514 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 CTNNB1P35222 781 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 QARSP47897 775 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 GPC3P51654 580 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 MRPS5P82675 430 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 GUCY1B3Q02153 619 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 BTG3Q14201 252 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 PLA2G4FQ68DD2 849 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 NCAPH2Q6IBW4 605 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 ANO5Q75V66 913 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 SLFN12Q8IYM2 578 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 ADAM2Q99965 735 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 SH2D3AQ9BRG2 576 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 LRFN2Q9ULH4 789 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 PLXNA4Q9HCM2 1894 aa12.53□□□□□ -0.4
TRAPPC4-204ENST00000524797 DENND3A2RUS2 1198 aa12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 C9IYK1 514 aa12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 MAFO75444 373 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 P4HBP07237 508 aaKnown RBP12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 GATMP50440 423 aa12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 SPIRE1Q08AE8 756 aa12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 DRP2Q13474 957 aa12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 CLP1Q92989 425 aaKnown RBP12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 DYDC2Q96IM9 177 aa12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 C8orf76Q96K31 380 aa12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 ZNF668Q96K58 619 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 ASB2Q96Q27 587 aa12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 WRAP73Q9P2S5 460 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 RWDD3Q9Y3V2 267 aa12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 MRPL42Q9Y6G3 142 aaKnown RBP12.52□□□□□ -0.4
TRAPPC4-204ENST00000524797 C5orf67F2Z3F1 127 aa12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 RB1P06400 928 aa12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 IBSPP21815 317 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 BMPR1AP36894 532 aa12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 HMGN5P82970 282 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 RABEP1Q15276 862 aa12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 SAFBQ15424 915 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 CALCRLQ16602 461 aa12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 PTPROQ16827 1216 aa12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 PAN2Q504Q3 1202 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 SYMPKQ92797 1274 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 MRPL38Q96DV4 380 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms