RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 HSPA9P38646 679 aaKnown RBP12.08□□□□□ -0.48
HDAC9-228ENST00000524023 CCT5P48643 541 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 ERVK-9P63128 1117 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 PTPROQ16827 1216 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 TUBB8Q3ZCM7 444 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 RBM26Q5T8P6 1007 aaKnown RBP12.08□□□□□ -0.48
HDAC9-228ENST00000524023 KCTD16Q68DU8 428 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 TTC19Q6DKK2 380 aaPredicted RBP12.08□□□□□ -0.48
HDAC9-228ENST00000524023 SLC30A10Q6XR72 485 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 C1orf186Q6ZWK4 172 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 FAM186BQ8IYM0 893 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 MYCT1Q8N699 235 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 METTL13Q8N6R0 699 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 DYDC2Q96IM9 177 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDAC9-228ENST00000524023 TUFT1Q9NNX1 390 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 SERPINA10Q9UK55 444 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 TRPC5Q9UL62 973 aaPredicted RBP12.08□□□□□ -0.48
HDAC9-228ENST00000524023 STXBP5LQ9Y2K9 1186 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 BHMG1C9JSJ3 638 aaPredicted RBP12.08□□□□□ -0.48
HDAC9-228ENST00000524023 PGRMC1O00264 195 aaKnown RBP12.08□□□□□ -0.48
HDAC9-228ENST00000524023 ECE2O60344 883 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 PSMD10O75832 226 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 GFPT2O94808 682 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 ECHS1P30084 290 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 STAT1P42224 750 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 NPEPPSP55786 919 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 RRP1BQ14684 758 aaKnown RBP12.08□□□□□ -0.48
HDAC9-228ENST00000524023 ZC2HC1CQ53FD0 456 aaPredicted RBP12.08□□□□□ -0.48
HDAC9-228ENST00000524023 PEX26Q7Z412 305 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 TPH2Q8IWU9 490 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 SPICE1Q8N0Z3 855 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 OLIG1Q8TAK6 271 aa12.08□□□□□ -0.48
HDAC9-228ENST00000524023 U2AF1L4Q8WU68 220 aaKnown RBP12.08□□□□□ -0.48
HDAC9-228ENST00000524023 SUCLA2Q9P2R7 463 aaPredicted RBP12.08□□□□□ -0.48
HDAC9-228ENST00000524023 NOC2LQ9Y3T9 749 aaKnown RBP12.08□□□□□ -0.48
HDAC9-228ENST00000524023 ATRNL1Q5VV63 1379 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 RBBP6Q7Z6E9 1792 aaKnown RBP12.07□□□□□ -0.48
HDAC9-228ENST00000524023 TMCO5BA8MYB1 307 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 ZBTB39O15060 712 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 SART1O43290 800 aaKnown RBP12.07□□□□□ -0.48
HDAC9-228ENST00000524023 PPP1R12BO60237 982 aaPredicted RBP12.07□□□□□ -0.48
HDAC9-228ENST00000524023 EVI5O60447 810 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 PDCLQ13371 301 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 CUL1Q13616 776 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 EMC10Q5UCC4 262 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 LRCH2Q5VUJ6 765 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 KDM7AQ6ZMT4 941 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 SYCE1Q8N0S2 351 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 RASGEF1CQ8N431 466 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 C1orf131Q8NDD1 294 aaKnown RBP12.07□□□□□ -0.48
HDAC9-228ENST00000524023 SLC30A5Q8TAD4 765 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 LNX1Q8TBB1 728 aaPredicted RBP12.07□□□□□ -0.48
HDAC9-228ENST00000524023 ZNF622Q969S3 477 aaKnown RBP eCLIP12.07□□□□□ -0.48
HDAC9-228ENST00000524023 AP1M1Q9BXS5 423 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 RABEP2Q9H5N1 569 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 TDRD3Q9H7E2 651 aaKnown RBP12.07□□□□□ -0.48
HDAC9-228ENST00000524023 PARVGQ9HBI0 331 aa12.07□□□□□ -0.48
HDAC9-228ENST00000524023 MYH11P35749 1972 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 SHTN1A0MZ66 631 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 CCDC188H7C350 402 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 EBAG9O00559 213 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 CHMP2AO43633 222 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 SOX5P35711 763 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 FMO5P49326 533 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 ATP1A2P50993 1020 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 GALCP54803 685 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 PPP2R5CQ13362 524 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 HLTFQ14527 1009 aaKnown RBP eCLIP12.06□□□□□ -0.48
HDAC9-228ENST00000524023 COG2Q14746 738 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 DAAM2Q86T65 1068 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 NT5DC3Q86UY8 548 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 COL23A1Q86Y22 540 aaPredicted RBP12.06□□□□□ -0.48
HDAC9-228ENST00000524023 SLC5A5Q92911 643 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 FIZ1Q96SL8 496 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 MKNK1Q9BUB5 465 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 F8VZ95 297 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 KRIT1O00522 736 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 ENTPD3O75355 529 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 CFBP00751 764 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 STAT2P52630 851 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 ZNF131P52739 623 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 ZNF720Q7Z2F6 126 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 KSR1Q8IVT5 923 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 HES6Q96HZ4 224 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 STK33Q9BYT3 514 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 DDX47Q9H0S4 455 aaKnown RBP12.06□□□□□ -0.48
HDAC9-228ENST00000524023 DMAC2Q9NW81 257 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 SEL1LQ9UBV2 794 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 PLAAQ9Y263 795 aa12.06□□□□□ -0.48
HDAC9-228ENST00000524023 UBE4BO95155 1302 aa12.05□□□□□ -0.48
HDAC9-228ENST00000524023 FRMPD4Q14CM0 1322 aa12.05□□□□□ -0.48
HDAC9-228ENST00000524023 MMP10P09238 476 aa12.05□□□□□ -0.48
HDAC9-228ENST00000524023 NR1D1P20393 614 aa12.05□□□□□ -0.48
HDAC9-228ENST00000524023 ECE1P42892 770 aa12.05□□□□□ -0.48
HDAC9-228ENST00000524023 PRELPP51888 382 aa12.05□□□□□ -0.48
HDAC9-228ENST00000524023 MAATS1Q7Z4T9 603 aa12.05□□□□□ -0.48
HDAC9-228ENST00000524023 DDX42Q86XP3 938 aaKnown RBP eCLIP12.05□□□□□ -0.48
HDAC9-228ENST00000524023 GLYCTKQ8IVS8 523 aa12.05□□□□□ -0.48
HDAC9-228ENST00000524023 TEX2Q8IWB9 1127 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms