RNA–Protein interactions for RNA: ENST00000523862.5

AP003548.1-201, humanhuman

TSL 3 BASIC

Gene AP003548.1, Length 711 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003548.1-201ENST00000523862 CAP2P40123 477 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 TRAPPC10P48553 1259 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 ERVK-24P63145 666 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 MRPS5P82675 430 aaKnown RBP7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 MYL5Q02045 173 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 PTK7Q13308 1070 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 PICALMQ13492 652 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 RRP1BQ14684 758 aaKnown RBP7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 TEAD4Q15561 434 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 ZRSR1Q15695 479 aaKnown RBP7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 ZNF385CQ66K41 422 aaPredicted RBP7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 ARMCX5Q6P1M9 558 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 TMC6Q7Z403 805 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 PLEKHH3Q7Z736 793 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 LRRC8AQ8IWT6 810 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 C1orf216Q8TAB5 229 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 FERMT2Q96AC1 680 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 TRIM43Q96BQ3 446 aaPredicted RBP7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 CEP95Q96GE4 821 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 PAGE5Q96GU1 130 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 SPZ1Q9BXG8 430 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 ZCCHC2Q9C0B9 1178 aaKnown RBP7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 CRISPLD1Q9H336 500 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 ZNF576Q9H609 170 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 INTS13Q9NVM9 706 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 FLRT1Q9NZU1 646 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 STX8Q9UNK0 236 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 ATP11BQ9Y2G3 1177 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 LRRC37A2A6NM11 1700 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 XIRP2A4UGR9 3374 aa7.54□□□□□ -1.2
AP003548.1-201ENST00000523862 UQCRHLA0A096LP55 91 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 VWA3AA6NCI4 1184 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 USP27XA6NNY8 438 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 USP17L15C9J2P7 530 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 C19orf81C9J6K1 198 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 USP17L10C9JJH3 530 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 USP17L13C9JLJ4 530 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 USP17L11C9JVI0 530 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 KLRF2D3W0D1 207 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 USP17L18D6R9N7 530 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 USP17L22D6RA61 530 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 USP17L17D6RBQ6 530 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 USP17L19D6RCP7 530 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 USP17L20D6RJB6 530 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 PEX10O60683 326 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 UQCRHP07919 91 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 SLFN14P0C7P3 912 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 CYBAP13498 195 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 ZNF18P17022 549 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 CALML3P27482 149 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 MCM7P33993 719 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 SHMT1P34896 483 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 AFMP43652 599 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 EPHB4P54760 987 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 BACE1P56817 501 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 TPM4P67936 248 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 IRX3P78415 501 aaPredicted RBP7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 USP17L24Q0WX57 530 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 PTPN21Q16825 1174 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 MFSD14CQ5VZR4 134 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 LYPD4Q6UWN0 246 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 HEATR3Q7Z4Q2 680 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 FILIP1Q7Z7B0 1213 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 CLEC10AQ8IUN9 316 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 ANKMY2Q8IV38 441 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 ZSCAN29Q8IWY8 852 aaPredicted RBP7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 ARRDC4Q8NCT1 418 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 TRPV1Q8NER1 839 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 SCG3Q8WXD2 468 aaKnown RBP7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 SMARCE1Q969G3 411 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 RNPC3Q96LT9 517 aaKnown RBP7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 LZTS2Q9BRK4 669 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 TMEM60Q9H2L4 133 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 AS3MTQ9HBK9 375 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 NEUROD4Q9HD90 331 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 FANCLQ9NW38 375 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 BARHL2Q9NY43 387 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 PHF24Q9UPV7 400 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 BRWD1Q9NSI6 2320 aa7.53□□□□□ -1.2
AP003548.1-201ENST00000523862 FRMPD2Q68DX3 1309 aaPredicted RBP7.52□□□□□ -1.2
AP003548.1-201ENST00000523862 COL11A1P12107 1806 aaPredicted RBP7.52□□□□□ -1.2
AP003548.1-201ENST00000523862 PRRC2BQ5JSZ5 2229 aaKnown RBP7.52□□□□□ -1.2
AP003548.1-201ENST00000523862 SLC15A5A6NIM6 579 aa7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 KIAA0355O15063 1070 aa7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 ATXN7O15265 892 aaPredicted RBP7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 EDIL3O43854 480 aa7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 NEMFO60524 1076 aa7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 PARP1P09874 1014 aaKnown RBP7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 ITGB8P26012 769 aa7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 CUL4BQ13620 913 aa7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 UBAP2LQ14157 1087 aaKnown RBP7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 GRB14Q14449 540 aa7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 LBRQ14739 615 aaKnown RBP7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 TRIM60Q495X7 471 aa7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 RASIP1Q5U651 963 aa7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 KANK3Q6NY19 840 aa7.52□□□□□ -1.21
AP003548.1-201ENST00000523862 LRRC47Q8N1G4 583 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms