RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 KIAA0319LQ8IZA0 1049 aa9.05□□□□□ -0.96
NSMCE2-213ENST00000523824 TMTC2Q8N394 836 aa9.05□□□□□ -0.96
NSMCE2-213ENST00000523824 CCDC82Q8N4S0 544 aa9.05□□□□□ -0.96
NSMCE2-213ENST00000523824 CYP2W1Q8TAV3 490 aa9.05□□□□□ -0.96
NSMCE2-213ENST00000523824 CASP10Q92851 521 aa9.05□□□□□ -0.96
NSMCE2-213ENST00000523824 ZNF558Q96NG5 402 aa9.05□□□□□ -0.96
NSMCE2-213ENST00000523824 NECTIN4Q96NY8 510 aa9.05□□□□□ -0.96
NSMCE2-213ENST00000523824 PPP1R16BQ96T49 567 aa9.05□□□□□ -0.96
NSMCE2-213ENST00000523824 TMEM117Q9H0C3 514 aa9.05□□□□□ -0.96
NSMCE2-213ENST00000523824 MFSD1Q9H3U5 465 aa9.05□□□□□ -0.96
NSMCE2-213ENST00000523824 ELAC1Q9H777 363 aaKnown RBP9.05□□□□□ -0.96
NSMCE2-213ENST00000523824 KIAA1671Q9BY89 1806 aa9.05□□□□□ -0.96
NSMCE2-213ENST00000523824 PLXNA4Q9HCM2 1894 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 COL1A2P08123 1366 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 C2CD4DB7Z1M9 353 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 DDX39AO00148 427 aaKnown RBP9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 ATG7O95352 703 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 CALM1P0DP23 149 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 CALM2P0DP24 149 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 CALM3P0DP25 149 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 ZSCAN20P17040 1043 aaPredicted RBP9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 RXRAP19793 462 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 PPM1AP35813 382 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 ZNF76P36508 570 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 NBL1P41271 181 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 MTHFRP42898 656 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 ITIH3Q06033 890 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 ITGB3BPQ13352 177 aaPredicted RBP9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 SMC1AQ14683 1233 aaKnown RBP9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 BMS1Q14692 1282 aaKnown RBP9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 CEP55Q53EZ4 464 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 ZNF484Q5JVG2 852 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 ASTLQ6HA08 431 aaPredicted RBP9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 FAM228AQ86W67 206 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 CKAP2LQ8IYA6 745 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 ABI1Q8IZP0 508 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 METTL13Q8N6R0 699 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 TMEM105Q8N8V8 129 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 TMEM87AQ8NBN3 555 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 TMEM40Q8WWA1 233 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 NKD2Q969F2 451 aaPredicted RBP9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 CASD1Q96PB1 797 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 OSMRQ99650 979 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 ADAM7Q9H2U9 754 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 POMKQ9H5K3 350 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 AGO4Q9HCK5 861 aaKnown RBP9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 ZNF302Q9NR11 478 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 SPG21Q9NZD8 308 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 CDH22Q9UJ99 828 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 HCFC2Q9Y5Z7 792 aa9.04□□□□□ -0.96
NSMCE2-213ENST00000523824 RIF1Q5UIP0 2472 aaKnown RBP9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 IGKV6D-21A0A0A0MT36 114 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 PRC1O43663 620 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 FOSP01100 380 aaPredicted RBP9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 CHMLP26374 656 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 MCM5P33992 734 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 PBX3P40426 434 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 DSC3Q14574 896 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 RARS2Q5T160 578 aaKnown RBP9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 SWSAP1Q6NVH7 229 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 MIS18BP1Q6P0N0 1132 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 PDXDC2PQ6P474 469 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 ABHD15Q6UXT9 468 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 LRRC55Q6ZSA7 311 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 ERMP1Q7Z2K6 904 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 FRMD5Q7Z6J6 570 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 RAB11FIP4Q86YS3 637 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 LRRC43Q8N309 656 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 MRPL43Q8N983 215 aaKnown RBP9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 RNF169Q8NCN4 708 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 PGBD1Q96JS3 809 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 TMEM87BQ96K49 555 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 MTA3Q9BTC8 594 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 SMOC2Q9H3U7 446 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 LIMD1Q9UGP4 676 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 DBR1Q9UK59 544 aaKnown RBP9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 SLC12A7Q9Y666 1083 aa9.03□□□□□ -0.96
NSMCE2-213ENST00000523824 WDR87Q6ZQQ6 2873 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 C2orf71A6NGG8 1288 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 MEIS1O00470 390 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 SH2B2O14492 632 aaPredicted RBP9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 CLASP2O75122 1294 aaKnown RBP9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 GPR32O75388 356 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 CXCL14O95715 111 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 CCNE2O96020 404 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 VTNP04004 478 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 ASGR2P07307 311 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 WEE2P0C1S8 567 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 GSPT1P15170 499 aaKnown RBP9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 ID4P47928 161 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 CLCN5P51795 746 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 NAPAP54920 295 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 ATAT1Q5SQI0 421 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 TTC22Q5TAA0 569 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 MCTP2Q6DN12 878 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 TMTC3Q6ZXV5 915 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 TRMT1LQ7Z2T5 733 aaKnown RBP9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 CCDC60Q8IWA6 550 aaPredicted RBP9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 ZDHHC14Q8IZN3 488 aa9.02□□□□□ -0.97
NSMCE2-213ENST00000523824 ADSSL1Q8N142 457 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms