RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 CUTAO60888 179 aa7.66□□□□□ -1.18
CPNE3-207ENST00000523588 LSP1P33241 339 aa7.66□□□□□ -1.18
CPNE3-207ENST00000523588 ETV4P43268 484 aa7.66□□□□□ -1.18
CPNE3-207ENST00000523588 NFKB2Q00653 900 aa7.66□□□□□ -1.18
CPNE3-207ENST00000523588 RNF187Q5TA31 235 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-207ENST00000523588 BROXQ5VW32 411 aa7.66□□□□□ -1.18
CPNE3-207ENST00000523588 LHFPL2Q6ZUX7 228 aa7.66□□□□□ -1.18
CPNE3-207ENST00000523588 BCL6BQ8N143 479 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-207ENST00000523588 WDR48Q8TAF3 677 aa7.66□□□□□ -1.18
CPNE3-207ENST00000523588 SLC5A5Q92911 643 aa7.66□□□□□ -1.18
CPNE3-207ENST00000523588 C20orf173Q96LM9 149 aa7.66□□□□□ -1.18
CPNE3-207ENST00000523588 POFUT1Q9H488 388 aa7.66□□□□□ -1.18
CPNE3-207ENST00000523588 ZDHHC9Q9Y397 364 aa7.66□□□□□ -1.18
CPNE3-207ENST00000523588 A0A0G2JNJ9 132 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 BRINP1O60477 761 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 PRPF6O94906 941 aaKnown RBP7.65□□□□□ -1.18
CPNE3-207ENST00000523588 STAT4Q14765 748 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 NOLC1Q14978 699 aaKnown RBP eCLIP7.65□□□□□ -1.18
CPNE3-207ENST00000523588 DDB1Q16531 1140 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 ZFYVE27Q5T4F4 411 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 PRAMEF9Q5VWM5 478 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 GRAMD4Q6IC98 578 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 FAM124AQ86V42 546 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 KBTBD2Q8IY47 623 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 C7orf31Q8N865 590 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 MYL10Q9BUA6 226 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 ADAM7Q9H2U9 754 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 Q9UFV3 132 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 RAPGEFL1Q9UHV5 662 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 CDC42EP3Q9UKI2 254 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 APOBEC2Q9Y235 224 aaKnown RBP7.65□□□□□ -1.18
CPNE3-207ENST00000523588 PTPN22Q9Y2R2 807 aa7.65□□□□□ -1.18
CPNE3-207ENST00000523588 ELL2O00472 640 aaPredicted RBP7.64□□□□□ -1.19
CPNE3-207ENST00000523588 ZNF888P0CJ79 500 aaPredicted RBP7.64□□□□□ -1.19
CPNE3-207ENST00000523588 KCNQ1P51787 676 aa7.64□□□□□ -1.19
CPNE3-207ENST00000523588 TRIM68Q6AZZ1 485 aa7.64□□□□□ -1.19
CPNE3-207ENST00000523588 BORAQ6PGQ7 559 aa7.64□□□□□ -1.19
CPNE3-207ENST00000523588 UNQ6494/PRO21346Q6UXR6 183 aa7.64□□□□□ -1.19
CPNE3-207ENST00000523588 LARP4Q71RC2 724 aaKnown RBP eCLIP7.64□□□□□ -1.19
CPNE3-207ENST00000523588 GPR155Q7Z3F1 870 aa7.64□□□□□ -1.19
CPNE3-207ENST00000523588 FAM177A1Q8N128 213 aaPredicted RBP7.64□□□□□ -1.19
CPNE3-207ENST00000523588 LGI4Q8N135 537 aa7.64□□□□□ -1.19
CPNE3-207ENST00000523588 CARD11Q9BXL7 1154 aa7.64□□□□□ -1.19
CPNE3-207ENST00000523588 USP36Q9P275 1121 aaKnown RBP7.64□□□□□ -1.19
CPNE3-207ENST00000523588 MSRAQ9UJ68 235 aa7.64□□□□□ -1.19
CPNE3-207ENST00000523588 INVSQ9Y283 1065 aa7.64□□□□□ -1.19
CPNE3-207ENST00000523588 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-207ENST00000523588 PRICKLE3O43900 615 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-207ENST00000523588 CANXP27824 592 aaKnown RBP7.63□□□□□ -1.19
CPNE3-207ENST00000523588 CNR2P34972 360 aa7.63□□□□□ -1.19
CPNE3-207ENST00000523588 ANTXR2P58335 489 aa7.63□□□□□ -1.19
CPNE3-207ENST00000523588 ADCY2Q08462 1091 aa7.63□□□□□ -1.19
CPNE3-207ENST00000523588 USP10Q14694 798 aaKnown RBP7.63□□□□□ -1.19
CPNE3-207ENST00000523588 ZNF827Q17R98 1081 aa7.63□□□□□ -1.19
CPNE3-207ENST00000523588 TIGD7Q6NT04 549 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-207ENST00000523588 OTOP2Q7RTS6 562 aa7.63□□□□□ -1.19
CPNE3-207ENST00000523588 FERMT3Q86UX7 667 aa7.63□□□□□ -1.19
CPNE3-207ENST00000523588 RASSF3Q86WH2 238 aa7.63□□□□□ -1.19
CPNE3-207ENST00000523588 CLRN3Q8NCR9 226 aa7.63□□□□□ -1.19
CPNE3-207ENST00000523588 TEPSINQ96N21 525 aa7.63□□□□□ -1.19
CPNE3-207ENST00000523588 RTEL1Q9NZ71 1219 aa7.63□□□□□ -1.19
CPNE3-207ENST00000523588 GPR39O43194 453 aa7.62□□□□□ -1.19
CPNE3-207ENST00000523588 BCAR1P56945 870 aa7.62□□□□□ -1.19
CPNE3-207ENST00000523588 KIAA1841Q6NSI8 718 aa7.62□□□□□ -1.19
CPNE3-207ENST00000523588 FRMD7Q6ZUT3 714 aa7.62□□□□□ -1.19
CPNE3-207ENST00000523588 RALYLQ86SE5 291 aaKnown RBP7.62□□□□□ -1.19
CPNE3-207ENST00000523588 IFNL2Q8IZJ0 200 aa7.62□□□□□ -1.19
CPNE3-207ENST00000523588 PITHD1Q9GZP4 211 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-207ENST00000523588 KCMF1Q9P0J7 381 aa7.62□□□□□ -1.19
CPNE3-207ENST00000523588 B4GALT4O60513 344 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 ULK1O75385 1050 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 APOL3O95236 402 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 HMGCRP04035 888 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 CPEP16870 476 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 SESN3P58005 492 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 AMPD3Q01432 767 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 MAP3K12Q12852 859 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 ZBTB41Q5SVQ8 909 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 ESPNLQ6ZVH7 1005 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 DDX42Q86XP3 938 aaKnown RBP eCLIP7.61□□□□□ -1.19
CPNE3-207ENST00000523588 OR5AN1Q8NGI8 311 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 HAPLN2Q9GZV7 340 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 MAGEL2Q9UJ55 1249 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 DENND2AQ9ULE3 1009 aa7.61□□□□□ -1.19
CPNE3-207ENST00000523588 PHLDB1Q86UU1 1377 aa7.6□□□□□ -1.19
CPNE3-207ENST00000523588 A0A0A6YYJ9 748 aa7.6□□□□□ -1.19
CPNE3-207ENST00000523588 STAT5BP51692 787 aa7.6□□□□□ -1.19
CPNE3-207ENST00000523588 TMPRSS15P98073 1019 aa7.6□□□□□ -1.19
CPNE3-207ENST00000523588 PDCD1Q15116 288 aa7.6□□□□□ -1.19
CPNE3-207ENST00000523588 DGKDQ16760 1214 aa7.6□□□□□ -1.19
CPNE3-207ENST00000523588 HDGFL2Q7Z4V5 671 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-207ENST00000523588 CXorf67Q86X51 503 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-207ENST00000523588 WDR66Q8TBY9 1149 aa7.6□□□□□ -1.19
CPNE3-207ENST00000523588 RPGRQ92834 1020 aaKnown RBP7.6□□□□□ -1.19
CPNE3-207ENST00000523588 KIAA1683Q9H0B3 1180 aa7.6□□□□□ -1.19
CPNE3-207ENST00000523588 MTG2Q9H4K7 406 aa7.6□□□□□ -1.19
CPNE3-207ENST00000523588 VTA1Q9NP79 307 aa7.6□□□□□ -1.19
CPNE3-207ENST00000523588 TOPORSQ9NS56 1045 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-207ENST00000523588 ATP8A1Q9Y2Q0 1164 aa7.6□□□□□ -1.19
CPNE3-207ENST00000523588 NOC2LQ9Y3T9 749 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms