RNA–Protein interactions for RNA: ENST00000523511.1

LSM1-205, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-205ENST00000523511 TARBP2Q15633 366 aaKnown RBP18.25■□□□□ 0.51
LSM1-205ENST00000523511 UGCGQ16739 394 aa18.25■□□□□ 0.51
LSM1-205ENST00000523511 NPAS4Q8IUM7 802 aa18.25■□□□□ 0.51
LSM1-205ENST00000523511 SP7Q8TDD2 431 aaPredicted RBP18.25■□□□□ 0.51
LSM1-205ENST00000523511 NLRP7Q8WX94 980 aa18.25■□□□□ 0.51
LSM1-205ENST00000523511 CEP170P1Q96L14 293 aa18.25■□□□□ 0.51
LSM1-205ENST00000523511 OSMRQ99650 979 aa18.25■□□□□ 0.51
LSM1-205ENST00000523511 OSBPL7Q9BZF2 842 aa18.25■□□□□ 0.51
LSM1-205ENST00000523511 ST3GAL5Q9UNP4 418 aa18.25■□□□□ 0.51
LSM1-205ENST00000523511 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.25■□□□□ 0.51
LSM1-205ENST00000523511 PCDHB7Q9Y5E2 793 aa18.25■□□□□ 0.51
LSM1-205ENST00000523511 SCN5AQ14524 2016 aa18.25■□□□□ 0.51
LSM1-205ENST00000523511 TRIP12Q14669 1992 aaPredicted RBP18.24■□□□□ 0.51
LSM1-205ENST00000523511 LCHNA4D1U4 455 aa18.24■□□□□ 0.51
LSM1-205ENST00000523511 EML1O00423 815 aa18.24■□□□□ 0.51
LSM1-205ENST00000523511 GAS2O43903 313 aaKnown RBP18.24■□□□□ 0.51
LSM1-205ENST00000523511 GPR32O75388 356 aa18.24■□□□□ 0.51
LSM1-205ENST00000523511 EIF4BP23588 611 aaKnown RBP18.24■□□□□ 0.51
LSM1-205ENST00000523511 RFC5P40937 340 aa18.24■□□□□ 0.51
LSM1-205ENST00000523511 ST3GAL1Q11201 340 aa18.24■□□□□ 0.51
LSM1-205ENST00000523511 ADGRE1Q14246 886 aa18.24■□□□□ 0.51
LSM1-205ENST00000523511 SLC24A5Q71RS6 500 aa18.24■□□□□ 0.51
LSM1-205ENST00000523511 NOSTRINQ8IVI9 506 aa18.24■□□□□ 0.51
LSM1-205ENST00000523511 LRRC71Q8N4P6 559 aa18.24■□□□□ 0.51
LSM1-205ENST00000523511 CCDC43Q96MW1 224 aaKnown RBP18.24■□□□□ 0.51
LSM1-205ENST00000523511 TBC1D32Q96NH3 1257 aa18.24■□□□□ 0.51
LSM1-205ENST00000523511 GCOM2Q9BZD3 368 aaPredicted RBP18.24■□□□□ 0.51
LSM1-205ENST00000523511 CYP26B1Q9NR63 512 aa18.24■□□□□ 0.51
LSM1-205ENST00000523511 NOC2LQ9Y3T9 749 aaKnown RBP18.24■□□□□ 0.51
LSM1-205ENST00000523511 LAMA2P24043 3122 aaKnown RBP18.23■□□□□ 0.51
LSM1-205ENST00000523511 MAFO75444 373 aaPredicted RBP18.23■□□□□ 0.51
LSM1-205ENST00000523511 YWHABP31946 246 aaKnown RBP18.23■□□□□ 0.51
LSM1-205ENST00000523511 MCM7P33993 719 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 POLGP54098 1239 aaPredicted RBP18.23■□□□□ 0.51
LSM1-205ENST00000523511 BTG3Q14201 252 aaPredicted RBP18.23■□□□□ 0.51
LSM1-205ENST00000523511 PTPROQ16827 1216 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 TMEM266Q2M3C6 531 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 ANO5Q75V66 913 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 TPH2Q8IWU9 490 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 FBXO22Q8NEZ5 403 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 ERMNQ8TAM6 284 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 TCP11Q8WWU5 503 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 LXNQ9BS40 222 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 ERVK-5Q9HDB9 667 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 RGS18Q9NS28 235 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 SUCLA2Q9P2R7 463 aaPredicted RBP18.23■□□□□ 0.51
LSM1-205ENST00000523511 MTUS1Q9ULD2 1270 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 STK24Q9Y6E0 443 aa18.23■□□□□ 0.51
LSM1-205ENST00000523511 FAM205CA6NFA0 338 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 H3BQV1 296 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 RB1P06400 928 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 SARSP49591 514 aaKnown RBP18.22■□□□□ 0.51
LSM1-205ENST00000523511 SKIV2LQ15477 1246 aaKnown RBP18.22■□□□□ 0.51
LSM1-205ENST00000523511 CCDC85BQ15834 202 aaPredicted RBP18.22■□□□□ 0.51
LSM1-205ENST00000523511 ZNF410Q86VK4 478 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 MICALL1Q8N3F8 863 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 LINC01465Q8N7H1 131 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 DYDC2Q96IM9 177 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 TMX3Q96JJ7 454 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 PPP1R16BQ96T49 567 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 ADAM2Q99965 735 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 EIF2AK1Q9BQI3 630 aaKnown RBP18.22■□□□□ 0.51
LSM1-205ENST00000523511 CDHR5Q9HBB8 845 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 MTCH2Q9Y6C9 303 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 KAT6AQ92794 2004 aa18.22■□□□□ 0.51
LSM1-205ENST00000523511 IGKV6-21A0A0C4DH24 114 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 RFXAPO00287 272 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 ASAP2O43150 1006 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 DGKIO75912 1065 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 SLITRK3O94933 977 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 XRCC6P12956 609 aaKnown RBP eCLIP18.21■□□□□ 0.51
LSM1-205ENST00000523511 GPC3P51654 580 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 GRB10Q13322 594 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 TMEM192Q8IY95 271 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 SYMPKQ92797 1274 aaKnown RBP18.21■□□□□ 0.51
LSM1-205ENST00000523511 MTMR9Q96QG7 549 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 RAB34Q9BZG1 259 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 ADAMTS10Q9H324 1103 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 ANKEF1Q9NU02 776 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 DACT1Q9NYF0 836 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 SMC3Q9UQE7 1217 aa18.21■□□□□ 0.51
LSM1-205ENST00000523511 HOXA2O43364 376 aa18.2■□□□□ 0.5
LSM1-205ENST00000523511 STBD1O95210 358 aa18.2■□□□□ 0.5
LSM1-205ENST00000523511 LYPLA2O95372 231 aa18.2■□□□□ 0.5
LSM1-205ENST00000523511 DARSP14868 501 aaKnown RBP18.2■□□□□ 0.5
LSM1-205ENST00000523511 SFPQP23246 707 aaKnown RBP eCLIP18.2■□□□□ 0.5
LSM1-205ENST00000523511 CTTNQ14247 550 aaKnown RBP18.2■□□□□ 0.5
LSM1-205ENST00000523511 ZNF174Q15697 407 aa18.2■□□□□ 0.5
LSM1-205ENST00000523511 AAK1Q2M2I8 961 aa18.2■□□□□ 0.5
LSM1-205ENST00000523511 EPC2Q52LR7 807 aa18.2■□□□□ 0.5
LSM1-205ENST00000523511 XKR9Q5GH70 373 aa18.2■□□□□ 0.5
LSM1-205ENST00000523511 TTC38Q5R3I4 469 aa18.2■□□□□ 0.5
LSM1-205ENST00000523511 RTN4RL1Q86UN2 441 aaPredicted RBP18.2■□□□□ 0.5
LSM1-205ENST00000523511 RHPN2Q8IUC4 686 aa18.2■□□□□ 0.5
LSM1-205ENST00000523511 CMTR2Q8IYT2 770 aaKnown RBP18.2■□□□□ 0.5
LSM1-205ENST00000523511 ATXN2LQ8WWM7 1075 aaKnown RBP18.2■□□□□ 0.5
LSM1-205ENST00000523511 PSPC1Q8WXF1 523 aaKnown RBP18.2■□□□□ 0.5
LSM1-205ENST00000523511 HSD17B14Q9BPX1 270 aa18.2■□□□□ 0.5
LSM1-205ENST00000523511 ELAC1Q9H777 363 aaKnown RBP18.2■□□□□ 0.5
LSM1-205ENST00000523511 ATP6V0A4Q9HBG4 840 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms