RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 DENND2AQ9ULE3 1009 aa7.59□□□□□ -1.19
LINC00534-203ENST00000523406 AKT3Q9Y243 479 aa7.59□□□□□ -1.19
LINC00534-203ENST00000523406 C4BP0C0L5 1744 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 WDR33Q9C0J8 1336 aaKnown RBP7.58□□□□□ -1.2
LINC00534-203ENST00000523406 SCN7AQ01118 1682 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 E7EWF7 191 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 H3BS24 57 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 BAG4O95429 457 aaKnown RBP7.58□□□□□ -1.2
LINC00534-203ENST00000523406 FGAP02671 866 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 GNAT2P19087 354 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 HIBADHP31937 336 aaKnown RBP7.58□□□□□ -1.2
LINC00534-203ENST00000523406 DEKP35659 375 aaKnown RBP7.58□□□□□ -1.2
LINC00534-203ENST00000523406 HAND2P61296 217 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 TRDNQ13061 729 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 LONRF2Q1L5Z9 754 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 MSMPQ1L6U9 139 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 TTLL5Q6EMB2 1281 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 SDE2Q6IQ49 451 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 RALYLQ86SE5 291 aaKnown RBP7.58□□□□□ -1.2
LINC00534-203ENST00000523406 TSPYL5Q86VY4 417 aaPredicted RBP7.58□□□□□ -1.2
LINC00534-203ENST00000523406 TRIM59Q8IWR1 403 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 NACAP1Q9BZK3 213 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 GPATCH2Q9NW75 528 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 TPCN1Q9ULQ1 816 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 NAP1L2Q9ULW6 460 aaPredicted RBP7.58□□□□□ -1.2
LINC00534-203ENST00000523406 TAF6LQ9Y6J9 622 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 LRP5O75197 1615 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 LY75O60449 1722 aa7.58□□□□□ -1.2
LINC00534-203ENST00000523406 SBF2Q86WG5 1849 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 ZNF804BA4D1E1 1349 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 PITPNM2Q9BZ72 1349 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 TMEM265A0A087WTH1 108 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 WASH4PA8MWX3 477 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 NOP56O00567 594 aaKnown RBP7.57□□□□□ -1.2
LINC00534-203ENST00000523406 TBX1O43435 398 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 MBD4O95243 580 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 FAM153BP0C7A2 387 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 PDCP20941 246 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 TM4SF1P30408 202 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 PPP2R2AP63151 447 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 CHAF1AQ13111 956 aaPredicted RBP7.57□□□□□ -1.2
LINC00534-203ENST00000523406 STK3Q13188 491 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 GRB10Q13322 594 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 SQSTM1Q13501 440 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 PKP1Q13835 747 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 ME3Q16798 604 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 CLEC16AQ2KHT3 1053 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 GAB4Q2WGN9 574 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 MCTP1Q6DN14 999 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 CLEC17AQ6ZS10 378 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 ZNF655Q8N720 491 aaPredicted RBP7.57□□□□□ -1.2
LINC00534-203ENST00000523406 NECAB1Q8N987 351 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 PPP1R14AQ96A00 147 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 FAM84BQ96KN1 310 aaPredicted RBP7.57□□□□□ -1.2
LINC00534-203ENST00000523406 STRBPQ96SI9 672 aaKnown RBP7.57□□□□□ -1.2
LINC00534-203ENST00000523406 ARHGEF4Q9NR80 690 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 SF3B6Q9Y3B4 125 aaKnown RBP7.57□□□□□ -1.2
LINC00534-203ENST00000523406 ATP6V1DQ9Y5K8 247 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 SLC4A4Q9Y6R1 1079 aa7.57□□□□□ -1.2
LINC00534-203ENST00000523406 DDX60Q8IY21 1712 aaKnown RBP7.57□□□□□ -1.2
LINC00534-203ENST00000523406 TCRBV5S4A2TA0A5A2 114 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 H0Y8X5 98 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 POLRMTO00411 1230 aaKnown RBP7.56□□□□□ -1.2
LINC00534-203ENST00000523406 ENPP3O14638 875 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 STX6O43752 255 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 BBOX1O75936 387 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 LARGE1O95461 756 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 GSNP06396 782 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 NCLP19338 710 aaKnown RBP7.56□□□□□ -1.2
LINC00534-203ENST00000523406 GJB2P29033 226 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 MCM5P33992 734 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 TDO2P48775 406 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 TOB2Q14106 344 aaPredicted RBP7.56□□□□□ -1.2
LINC00534-203ENST00000523406 PPP2R5DQ14738 602 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 ALX1Q15699 326 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 SPTY2D1Q68D10 685 aaPredicted RBP7.56□□□□□ -1.2
LINC00534-203ENST00000523406 NAA16Q6N069 864 aaPredicted RBP7.56□□□□□ -1.2
LINC00534-203ENST00000523406 POMZP3Q6PJE2 187 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 STOX1Q6ZVD7 989 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 ZNF804AQ7Z570 1209 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 CRACR2BQ8N4Y2 399 aaPredicted RBP7.56□□□□□ -1.2
LINC00534-203ENST00000523406 NCOA7Q8NI08 942 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 TCTN2Q96GX1 697 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 LRRC2Q9BYS8 371 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 NAPBQ9H115 298 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 TMX4Q9H1E5 349 aaPredicted RBP7.56□□□□□ -1.2
LINC00534-203ENST00000523406 ARMT1Q9H993 441 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 TMEM260Q9NX78 707 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 ZSWIM5Q9P217 1185 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 ZDHHC9Q9Y397 364 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 LAMB2P55268 1798 aa7.56□□□□□ -1.2
LINC00534-203ENST00000523406 XDHP47989 1333 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 VPS37CA5D8V6 355 aaPredicted RBP7.55□□□□□ -1.2
LINC00534-203ENST00000523406 WTIPA6NIX2 430 aaPredicted RBP7.55□□□□□ -1.2
LINC00534-203ENST00000523406 MEIS1O00470 390 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 PRC1O43663 620 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 ZSCAN22P10073 491 aaPredicted RBP7.55□□□□□ -1.2
LINC00534-203ENST00000523406 SYT1P21579 422 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 TPP2P29144 1249 aaPredicted RBP7.55□□□□□ -1.2
LINC00534-203ENST00000523406 EXOSC10Q01780 885 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms