RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 CPXCR1Q8N123 301 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.63□□□□□ -1.19
CSMD1-211ENST00000523062 EPS8L1Q8TE68 723 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 TBC1D5Q92609 795 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 SLC5A5Q92911 643 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 GJA10Q969M2 543 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 ATG4CQ96DT6 458 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 NAP1L5Q96NT1 182 aaPredicted RBP7.63□□□□□ -1.19
CSMD1-211ENST00000523062 POLR3CQ9BUI4 534 aaPredicted RBP7.63□□□□□ -1.19
CSMD1-211ENST00000523062 THAP9Q9H5L6 903 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 RAVER2Q9HCJ3 691 aaKnown RBP7.63□□□□□ -1.19
CSMD1-211ENST00000523062 SPTLC3Q9NUV7 552 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 INTS13Q9NVM9 706 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 LIMA1Q9UHB6 759 aaKnown RBP7.63□□□□□ -1.19
CSMD1-211ENST00000523062 KIAA1024Q9UPX6 916 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 RBBP6Q7Z6E9 1792 aaKnown RBP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 MEIS1O00470 390 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 PPP1R12BO60237 982 aaPredicted RBP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 GAS7O60861 476 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 MED24O75448 989 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 USP2O75604 605 aaPredicted RBP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 OFD1O75665 1012 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 SSBP05455 408 aaKnown RBP eCLIP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 IDEP14735 1019 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 MUTP22033 750 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 CCNE1P24864 410 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 EEF1GP26641 437 aaKnown RBP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 NF2P35240 595 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 IREB2P48200 963 aaKnown RBP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 COASYQ13057 564 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 PPP2R5CQ13362 524 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 DGKZQ13574 1117 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 NOLC1Q14978 699 aaKnown RBP eCLIP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 ECM1Q16610 540 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 TKFCQ3LXA3 575 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 SH3D19Q5HYK7 790 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 SPECC1LQ69YQ0 1117 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 TTI2Q6NXR4 508 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 FOXR2Q6PJQ5 311 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 APTXQ7Z2E3 356 aaKnown RBP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 FAM114A1Q8IWE2 563 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 CCDC65Q8IXS2 484 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 GUF1Q8N442 669 aaKnown RBP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 KIAA0895Q8NCT3 520 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 CCDC112Q8NEF3 446 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 SYTL5Q8TDW5 730 aaPredicted RBP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 P2RX5Q93086 422 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 UIMC1Q96RL1 719 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 RIT2Q99578 217 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 MXRA8Q9BRK3 442 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 ZNF577Q9BSK1 485 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 TEKT3Q9BXF9 490 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 WDR11Q9BZH6 1224 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 MAF1Q9H063 256 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 TUFT1Q9NNX1 390 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 RNF146Q9NTX7 359 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 MAGEC2Q9UBF1 373 aaPredicted RBP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 ADD3Q9UEY8 706 aaKnown RBP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 ATXN7L1Q9ULK2 861 aaPredicted RBP7.62□□□□□ -1.19
CSMD1-211ENST00000523062 DNM3Q9UQ16 869 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 MAPK8IP1Q9UQF2 711 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 CSADQ9Y600 493 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 SNCAIPQ9Y6H5 919 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 PHIPQ8WWQ0 1821 aa7.62□□□□□ -1.19
CSMD1-211ENST00000523062 ITIH6Q6UXX5 1313 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 TRIM49BA6NDI0 452 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 KCNJ18B7U540 433 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 ADM5C9JUS6 153 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 E9PMD0 336 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 ATP2A1O14983 1001 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 PSMD10O75832 226 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 KIF20AO95235 890 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 KRT18P05783 430 aaKnown RBP7.61□□□□□ -1.19
CSMD1-211ENST00000523062 TPM2P07951 284 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 FCER1AP12319 257 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 SKILP12757 684 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 CYP11B2P19099 503 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 KCNJ6P48051 423 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 COPB1P53618 953 aaKnown RBP7.61□□□□□ -1.19
CSMD1-211ENST00000523062 SLC12A3P55017 1021 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 ERVK-9P63128 1117 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 UBXN2AP68543 259 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 CCZ1BP86790 482 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 CCZ1P86791 482 aaPredicted RBP7.61□□□□□ -1.19
CSMD1-211ENST00000523062 EHHADHQ08426 723 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 STK4Q13043 487 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 TBX2Q13207 712 aaPredicted RBP7.61□□□□□ -1.19
CSMD1-211ENST00000523062 VGLL4Q14135 290 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 KCNJ12Q14500 433 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 COG2Q14746 738 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 NR1I3Q14994 352 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 KRT31Q15323 416 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 TCP11X2Q5H9J9 407 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 MUM1L1Q5H9M0 696 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 FAM26FQ5R3K3 315 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 PCNX4Q63HM2 1172 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 ARMCX5Q6P1M9 558 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 XRRA1Q6P2D8 792 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 SLC30A10Q6XR72 485 aa7.61□□□□□ -1.19
CSMD1-211ENST00000523062 RNF207Q6ZRF8 634 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms