RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 IL15P40933 162 aaPredicted RBP8.12□□□□□ -1.11
SDCBP-210ENST00000522843 PRKCQQ04759 706 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 KIAA1755Q5JYT7 1200 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 TATDN1Q6P1N9 297 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 PSRC1Q6PGN9 363 aaPredicted RBP8.12□□□□□ -1.11
SDCBP-210ENST00000522843 SHCBP1Q8NEM2 672 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 TGFBRAP1Q8WUH2 860 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 IL23AQ9NPF7 189 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 AATFQ9NY61 560 aaKnown RBP eCLIP8.12□□□□□ -1.11
SDCBP-210ENST00000522843 SAP30BPQ9UHR5 308 aaKnown RBP8.12□□□□□ -1.11
SDCBP-210ENST00000522843 ADAMTS6Q9UKP5 1117 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 CFAP54Q96N23 3096 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 A0A1B0GUL7 405 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 A0A1W2PRG0 241 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 ADCY6O43306 1168 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 ANP32CO43423 234 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 LDHCP07864 332 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 FAM87AP0C7U9 286 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 GSTO1P78417 241 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 ORC1Q13415 861 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 KCNA10Q16322 511 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 OTOP2Q7RTS6 562 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 FAM126BQ8IXS8 530 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 ABRAQ8N0Z2 381 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 CRACR2BQ8N4Y2 399 aaPredicted RBP8.11□□□□□ -1.11
SDCBP-210ENST00000522843 TMEM199Q8N511 208 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 SPATA5Q8NB90 893 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 FEZ1Q99689 392 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 CERS4Q9HA82 394 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 RAI14Q9P0K7 980 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 NRBP1Q9UHY1 535 aa8.11□□□□□ -1.11
SDCBP-210ENST00000522843 NDUFB5O43674 189 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 CD4P01730 458 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 FGBP02675 491 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 PGK2P07205 417 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 MCAMP43121 646 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 USP14P54578 494 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 TFCP2Q12800 502 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 CDK5R2Q13319 367 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 COG2Q14746 738 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 RAB3GAP1Q15042 981 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 KRTAP19-4Q3LI73 84 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 WDR63Q8IWG1 891 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 FAM181AQ8N9Y4 354 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 LRRN4CLQ8ND94 238 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 FAM129BQ96TA1 746 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 TINF2Q9BSI4 451 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 COPRSQ9NQ92 184 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 COG5Q9UP83 839 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 MYO5AQ9Y4I1 1855 aaKnown RBP8.1□□□□□ -1.11
SDCBP-210ENST00000522843 PARP14Q460N5 1801 aa8.1□□□□□ -1.11
SDCBP-210ENST00000522843 ELP1O95163 1332 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 ZDBF2Q9HCK1 2354 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 ARVCFO00192 962 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 CTAGE5O15320 804 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 LPXNO60711 386 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 AKR1A1P14550 325 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 SHMT1P34896 483 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 DYNLL1P63167 89 aaKnown RBP8.09□□□□□ -1.11
SDCBP-210ENST00000522843 CCDC174Q6PII3 467 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 NUP133Q8WUM0 1156 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 ATG4CQ96DT6 458 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 WNT8AQ9H1J5 351 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 MROH8Q9H579 483 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 PCDHA11Q9Y5I1 949 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 MYH1P12882 1939 aa8.09□□□□□ -1.11
SDCBP-210ENST00000522843 MYO15AQ9UKN7 3530 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 SNAI1O95863 264 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-210ENST00000522843 ASGR1P07306 291 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 CA3P07451 260 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 CST5P28325 142 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-210ENST00000522843 CD96P40200 585 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 CCL23P55773 120 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 AP3B2Q13367 1082 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 MVPQ14764 893 aaKnown RBP8.08□□□□□ -1.12
SDCBP-210ENST00000522843 TMEM132BQ14DG7 1078 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 SEPT2Q15019 361 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 IFI16Q16666 785 aaKnown RBP8.08□□□□□ -1.12
SDCBP-210ENST00000522843 ABCB5Q2M3G0 1257 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 KIAA0319Q5VV43 1072 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 BHLHE22Q8NFJ8 381 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-210ENST00000522843 FAM84AQ96KN4 292 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 PIDD1Q9HB75 910 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 MKNK2Q9HBH9 465 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 SLC5A4Q9NY91 659 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 HOXC10Q9NYD6 342 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 CRIM1Q9NZV1 1036 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 TRIOO75962 3097 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 DMDP11532 3685 aa8.08□□□□□ -1.12
SDCBP-210ENST00000522843 COL4A4P53420 1690 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-210ENST00000522843 COL11A1P12107 1806 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-210ENST00000522843 GRIN2DO15399 1336 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 A0A0U1RQG5 324 aaPredicted RBP8.07□□□□□ -1.12
SDCBP-210ENST00000522843 PATL2C9JE40 543 aaKnown RBP8.07□□□□□ -1.12
SDCBP-210ENST00000522843 GPR182O15218 404 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 TMPRSS2O15393 492 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 HLA-DOAP06340 250 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 FCER1AP12319 257 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 PLCD1P51178 756 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 TAP1Q03518 808 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms