RNA–Protein interactions for RNA: ENST00000522610.5

POLB-213, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 1,341 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-213ENST00000522610 ERMNQ8TAM6 284 aa13.57□□□□□ -0.24
POLB-213ENST00000522610 FOXD4L4Q8WXT5 416 aaPredicted RBP13.57□□□□□ -0.24
POLB-213ENST00000522610 SLC39A7Q92504 469 aa13.57□□□□□ -0.24
POLB-213ENST00000522610 CEP170P1Q96L14 293 aa13.57□□□□□ -0.24
POLB-213ENST00000522610 SUGCTQ9HAC7 445 aa13.57□□□□□ -0.24
POLB-213ENST00000522610 BMP2KQ9NSY1 1161 aaPredicted RBP13.57□□□□□ -0.24
POLB-213ENST00000522610 GINS2Q9Y248 185 aa13.57□□□□□ -0.24
POLB-213ENST00000522610 TRPV2Q9Y5S1 764 aa13.57□□□□□ -0.24
POLB-213ENST00000522610 WDR81Q562E7 1941 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 VWA3AA6NCI4 1184 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 MAFO75444 373 aaPredicted RBP13.56□□□□□ -0.24
POLB-213ENST00000522610 LYPLA2O95372 231 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 FXR1P51114 621 aaKnown RBP eCLIP13.56□□□□□ -0.24
POLB-213ENST00000522610 PLEKHG4Q58EX7 1191 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 XKR9Q5GH70 373 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 FBXO47Q5MNV8 452 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 HAUS3Q68CZ6 603 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 CNKSR3Q6P9H4 555 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 NME8Q8N427 588 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 SNX29Q8TEQ0 813 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 LRCH3Q96II8 777 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 MAP7D2Q96T17 732 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 POLR3CQ9BUI4 534 aaPredicted RBP13.56□□□□□ -0.24
POLB-213ENST00000522610 CELF4Q9BZC1 486 aaKnown RBP13.56□□□□□ -0.24
POLB-213ENST00000522610 RAB34Q9BZG1 259 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 MTIF3Q9H2K0 278 aaKnown RBP13.56□□□□□ -0.24
POLB-213ENST00000522610 TUFT1Q9NNX1 390 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 AKT3Q9Y243 479 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 CLIC4Q9Y696 253 aa13.56□□□□□ -0.24
POLB-213ENST00000522610 IGKV6-21A0A0C4DH24 114 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 ATMINO43313 823 aaPredicted RBP13.55□□□□□ -0.24
POLB-213ENST00000522610 ZSCAN22P10073 491 aaPredicted RBP13.55□□□□□ -0.24
POLB-213ENST00000522610 C7P10643 843 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 RPA1P27694 616 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 TMOD1P28289 359 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 CDC25AP30304 524 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 CCT6AP40227 531 aaKnown RBP13.55□□□□□ -0.24
POLB-213ENST00000522610 RARRES1P49788 294 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 POLGP54098 1239 aaPredicted RBP13.55□□□□□ -0.24
POLB-213ENST00000522610 CEBPZQ03701 1054 aaKnown RBP13.55□□□□□ -0.24
POLB-213ENST00000522610 BECN1Q14457 450 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 PDIA5Q14554 519 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 EMC2Q15006 297 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 ECM1Q16610 540 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 KIZQ2M2Z5 673 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 OTUD6AQ7L8S5 288 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 DBF4BQ8NFT6 615 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 PIGOQ8TEQ8 1089 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 TMEM40Q8WWA1 233 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 SLC7A3Q8WY07 619 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 ZNF668Q96K58 619 aaPredicted RBP13.55□□□□□ -0.24
POLB-213ENST00000522610 CCDC43Q96MW1 224 aaKnown RBP13.55□□□□□ -0.24
POLB-213ENST00000522610 OSMRQ99650 979 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 IFIH1Q9BYX4 1025 aaKnown RBP13.55□□□□□ -0.24
POLB-213ENST00000522610 ZSCAN16Q9H4T2 348 aaPredicted RBP13.55□□□□□ -0.24
POLB-213ENST00000522610 AGO3Q9H9G7 860 aaKnown RBP13.55□□□□□ -0.24
POLB-213ENST00000522610 CDHR5Q9HBB8 845 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 SLC4A7Q9Y6M7 1214 aa13.55□□□□□ -0.24
POLB-213ENST00000522610 MYH9P35579 1960 aaKnown RBP13.55□□□□□ -0.24
POLB-213ENST00000522610 GRXCR1A8MXD5 290 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 BAIAP3O94812 1187 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 BMP15O95972 392 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 F13A1P00488 732 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 CD52P31358 61 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 RFC5P40937 340 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 WDR5P61964 334 aaKnown RBP13.54□□□□□ -0.24
POLB-213ENST00000522610 GRIN1Q05586 938 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 PTPAQ15257 358 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 KRT79Q5XKE5 535 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 ARL6IP4Q66PJ3 421 aaKnown RBP13.54□□□□□ -0.24
POLB-213ENST00000522610 TSHZ1Q6ZSZ6 1077 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 SEPT8Q92599 483 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 USP28Q96RU2 1077 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 DHX33Q9H6R0 707 aaKnown RBP13.54□□□□□ -0.24
POLB-213ENST00000522610 ANKEF1Q9NU02 776 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 CHD7Q9P2D1 2997 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 PPME1Q9Y570 386 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 KDM3AQ9Y4C1 1321 aa13.54□□□□□ -0.24
POLB-213ENST00000522610 ARID2Q68CP9 1835 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 GPR32O75388 356 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 GPC3P51654 580 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 NLRP11P59045 1033 aaKnown RBP13.53□□□□□ -0.24
POLB-213ENST00000522610 DEFB103AP81534 67 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 IKBKEQ14164 716 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 FOXD4L6Q3SYB3 417 aaPredicted RBP13.53□□□□□ -0.24
POLB-213ENST00000522610 FOXD4L3Q6VB84 417 aaPredicted RBP13.53□□□□□ -0.24
POLB-213ENST00000522610 TMCO2Q7Z6W1 182 aaPredicted RBP13.53□□□□□ -0.24
POLB-213ENST00000522610 TMEM143Q96AN5 459 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 KIF12Q96FN5 646 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 SCLT1Q96NL6 688 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 NACC1Q96RE7 527 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 JPH2Q9BR39 696 aaPredicted RBP13.53□□□□□ -0.24
POLB-213ENST00000522610 MMTAG2Q9BU76 263 aaKnown RBP13.53□□□□□ -0.24
POLB-213ENST00000522610 ADAMTS10Q9H324 1103 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 XPNPEP1Q9NQW7 623 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 DDX19AQ9NUU7 478 aaKnown RBP13.53□□□□□ -0.24
POLB-213ENST00000522610 SUCLA2Q9P2R7 463 aaPredicted RBP13.53□□□□□ -0.24
POLB-213ENST00000522610 METRNQ9UJH8 293 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 KAT6AQ92794 2004 aa13.53□□□□□ -0.24
POLB-213ENST00000522610 TET1Q8NFU7 2136 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms