RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 GPR32O75388 356 aa23.12■■□□□ 1.29
SNHG6-203ENST00000520944 CLCN3P51790 818 aa23.12■■□□□ 1.29
SNHG6-203ENST00000520944 NPY5RQ15761 445 aa23.12■■□□□ 1.29
SNHG6-203ENST00000520944 LETM2Q2VYF4 491 aa23.12■■□□□ 1.29
SNHG6-203ENST00000520944 PAN2Q504Q3 1202 aaKnown RBP23.12■■□□□ 1.29
SNHG6-203ENST00000520944 LMAN2LQ9H0V9 348 aa23.12■■□□□ 1.29
SNHG6-203ENST00000520944 NSUN3Q9H649 340 aaKnown RBP23.12■■□□□ 1.29
SNHG6-203ENST00000520944 RGS18Q9NS28 235 aa23.12■■□□□ 1.29
SNHG6-203ENST00000520944 STK36Q9NRP7 1315 aa23.11■■□□□ 1.29
SNHG6-203ENST00000520944 LINC00271P0C7V0 271 aa23.11■■□□□ 1.29
SNHG6-203ENST00000520944 KCNA5P22460 613 aa23.11■■□□□ 1.29
SNHG6-203ENST00000520944 AK2P54819 239 aa23.11■■□□□ 1.29
SNHG6-203ENST00000520944 NLRP11P59045 1033 aaKnown RBP23.11■■□□□ 1.29
SNHG6-203ENST00000520944 TBC1D8BQ0IIM8 1120 aa23.11■■□□□ 1.29
SNHG6-203ENST00000520944 UGCGQ16739 394 aa23.11■■□□□ 1.29
SNHG6-203ENST00000520944 TCEAL5Q5H9L2 206 aa23.11■■□□□ 1.29
SNHG6-203ENST00000520944 SLC24A5Q71RS6 500 aa23.11■■□□□ 1.29
SNHG6-203ENST00000520944 LRRC71Q8N4P6 559 aa23.11■■□□□ 1.29
SNHG6-203ENST00000520944 MBOAT7Q96N66 472 aa23.11■■□□□ 1.29
SNHG6-203ENST00000520944 MRPL42Q9Y6G3 142 aaKnown RBP23.11■■□□□ 1.29
SNHG6-203ENST00000520944 TTC3P53804 2025 aa23.11■■□□□ 1.29
SNHG6-203ENST00000520944 BDP1A6H8Y1 2624 aa23.1■■□□□ 1.29
SNHG6-203ENST00000520944 MGEA5O60502 916 aa23.1■■□□□ 1.29
SNHG6-203ENST00000520944 EP400NLQ6ZTU2 488 aa23.1■■□□□ 1.29
SNHG6-203ENST00000520944 ETNPPLQ8TBG4 499 aa23.1■■□□□ 1.29
SNHG6-203ENST00000520944 ORC3Q9UBD5 711 aaPredicted RBP23.1■■□□□ 1.29
SNHG6-203ENST00000520944 GRM6O15303 877 aa23.09■■□□□ 1.29
SNHG6-203ENST00000520944 NCK2O43639 380 aa23.09■■□□□ 1.29
SNHG6-203ENST00000520944 MARCH6O60337 910 aa23.09■■□□□ 1.29
SNHG6-203ENST00000520944 LEXMQ3ZCV2 418 aa23.09■■□□□ 1.29
SNHG6-203ENST00000520944 NAALADL2Q58DX5 795 aa23.09■■□□□ 1.29
SNHG6-203ENST00000520944 XKR3Q5GH77 459 aa23.09■■□□□ 1.29
SNHG6-203ENST00000520944 NEK8Q86SG6 692 aa23.09■■□□□ 1.29
SNHG6-203ENST00000520944 FAM228AQ86W67 206 aa23.09■■□□□ 1.29
SNHG6-203ENST00000520944 P2RX5Q93086 422 aa23.09■■□□□ 1.29
SNHG6-203ENST00000520944 SCLT1Q96NL6 688 aa23.09■■□□□ 1.29
SNHG6-203ENST00000520944 NAP1L4Q99733 375 aaKnown RBP23.09■■□□□ 1.29
SNHG6-203ENST00000520944 SEPT9Q9UHD8 586 aaPredicted RBP23.09■■□□□ 1.29
SNHG6-203ENST00000520944 NCOR1O75376 2440 aa23.09■■□□□ 1.29
SNHG6-203ENST00000520944 GCFC2P16383 781 aaKnown RBP23.08■■□□□ 1.29
SNHG6-203ENST00000520944 ZSCAN20P17040 1043 aaPredicted RBP23.08■■□□□ 1.29
SNHG6-203ENST00000520944 PPP4R3AQ6IN85 833 aa23.08■■□□□ 1.29
SNHG6-203ENST00000520944 LINC01465Q8N7H1 131 aa23.08■■□□□ 1.29
SNHG6-203ENST00000520944 FAM20AQ96MK3 541 aa23.08■■□□□ 1.29
SNHG6-203ENST00000520944 NIFKQ9BYG3 293 aaKnown RBP23.08■■□□□ 1.29
SNHG6-203ENST00000520944 ADAMTS10Q9H324 1103 aa23.08■■□□□ 1.29
SNHG6-203ENST00000520944 ALG13Q9NP73 1137 aaKnown RBP23.08■■□□□ 1.29
SNHG6-203ENST00000520944 PLAGL2Q9UPG8 496 aa23.08■■□□□ 1.29
SNHG6-203ENST00000520944 DDX11L8A8MPP1 907 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 C9IYK1 514 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 CCNT1O60563 726 aaKnown RBP23.07■■□□□ 1.28
SNHG6-203ENST00000520944 CTDNEP1O95476 244 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 EIF4BP23588 611 aaKnown RBP23.07■■□□□ 1.28
SNHG6-203ENST00000520944 GATMP50440 423 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 DNM2P50570 870 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 CDC42EP1Q00587 391 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 MTERF2Q49AM1 385 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 SPOUT1Q5T280 376 aaKnown RBP23.07■■□□□ 1.28
SNHG6-203ENST00000520944 B3GNT9Q6UX72 402 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 PIK3AP1Q6ZUJ8 805 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 NECAB1Q8N987 351 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 PABPC5Q96DU9 382 aaKnown RBP23.07■■□□□ 1.28
SNHG6-203ENST00000520944 ATP6V0A4Q9HBG4 840 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 BRMS1Q9HCU9 246 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 GJB4Q9NTQ9 266 aa23.07■■□□□ 1.28
SNHG6-203ENST00000520944 TBKBP1A7MCY6 615 aa23.06■■□□□ 1.28
SNHG6-203ENST00000520944 SLC37A4O43826 429 aa23.06■■□□□ 1.28
SNHG6-203ENST00000520944 DTNBO60941 627 aa23.06■■□□□ 1.28
SNHG6-203ENST00000520944 CENPBP07199 599 aaPredicted RBP23.06■■□□□ 1.28
SNHG6-203ENST00000520944 NEK4P51957 841 aa23.06■■□□□ 1.28
SNHG6-203ENST00000520944 PSMC5P62195 406 aa23.06■■□□□ 1.28
SNHG6-203ENST00000520944 TARBP2Q15633 366 aaKnown RBP23.06■■□□□ 1.28
SNHG6-203ENST00000520944 PUS10Q3MIT2 529 aaKnown RBP23.06■■□□□ 1.28
SNHG6-203ENST00000520944 OXER1Q8TDS5 423 aa23.06■■□□□ 1.28
SNHG6-203ENST00000520944 NLRP7Q8WX94 980 aa23.06■■□□□ 1.28
SNHG6-203ENST00000520944 AAASQ9NRG9 546 aa23.06■■□□□ 1.28
SNHG6-203ENST00000520944 TMEM161AQ9NX61 479 aa23.06■■□□□ 1.28
SNHG6-203ENST00000520944 PCDHB12Q9Y5F1 795 aa23.06■■□□□ 1.28
SNHG6-203ENST00000520944 MYH9P35579 1960 aaKnown RBP23.05■■□□□ 1.28
SNHG6-203ENST00000520944 TCF20Q9UGU0 1960 aaKnown RBP23.05■■□□□ 1.28
SNHG6-203ENST00000520944 DKC1O60832 514 aaKnown RBP eCLIP23.05■■□□□ 1.28
SNHG6-203ENST00000520944 CSPG5O95196 566 aa23.05■■□□□ 1.28
SNHG6-203ENST00000520944 MMP1P03956 469 aa23.05■■□□□ 1.28
SNHG6-203ENST00000520944 GPC3P51654 580 aa23.05■■□□□ 1.28
SNHG6-203ENST00000520944 FAM189BP81408 668 aa23.05■■□□□ 1.28
SNHG6-203ENST00000520944 ME3Q16798 604 aa23.05■■□□□ 1.28
SNHG6-203ENST00000520944 FAM102BQ5T8I3 360 aa23.05■■□□□ 1.28
SNHG6-203ENST00000520944 PTCRAQ6ISU1 281 aaPredicted RBP23.05■■□□□ 1.28
SNHG6-203ENST00000520944 KLHL23Q8NBE8 558 aa23.05■■□□□ 1.28
SNHG6-203ENST00000520944 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.05■■□□□ 1.28
SNHG6-203ENST00000520944 PPP2R3CQ969Q6 453 aa23.05■■□□□ 1.28
SNHG6-203ENST00000520944 ZNF668Q96K58 619 aaPredicted RBP23.05■■□□□ 1.28
SNHG6-203ENST00000520944 ELAC1Q9H777 363 aaKnown RBP23.05■■□□□ 1.28
SNHG6-203ENST00000520944 CLDND1Q9NY35 253 aa23.05■■□□□ 1.28
SNHG6-203ENST00000520944 H3BQ06 376 aaPredicted RBP23.04■■□□□ 1.28
SNHG6-203ENST00000520944 ITGB1P05556 798 aa23.04■■□□□ 1.28
SNHG6-203ENST00000520944 KRT2P35908 639 aa23.04■■□□□ 1.28
SNHG6-203ENST00000520944 PPP2R5CQ13362 524 aa23.04■■□□□ 1.28
SNHG6-203ENST00000520944 DSC3Q14574 896 aa23.04■■□□□ 1.28
SNHG6-203ENST00000520944 NEK9Q8TD19 979 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms