RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 AKAP13Q12802 2813 aa9.2□□□□□ -0.94
CSMD1-209ENST00000520630 ATG2BQ96BY7 2078 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 B4E1Z4 1266 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 ZBTB5O15062 677 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 FIBPO43427 364 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 PARP1P09874 1014 aaKnown RBP9.19□□□□□ -0.94
CSMD1-209ENST00000520630 PAK2Q13177 524 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 TDGQ13569 410 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 SEC23AQ15436 765 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 TPRNQ4KMQ1 711 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 CES5AQ6NT32 575 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 KCNT2Q6UVM3 1135 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 RSPH3Q86UC2 560 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 RSAD2Q8WXG1 361 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 AUTS2Q8WXX7 1259 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 RUBCNQ92622 972 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 PIGSQ96S52 555 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 ADAM2Q99965 735 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 RIOX1Q9H6W3 641 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 NGRNQ9NPE2 291 aaKnown RBP9.19□□□□□ -0.94
CSMD1-209ENST00000520630 ENTPD7Q9NQZ7 604 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 CYP26B1Q9NR63 512 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 LRFN2Q9ULH4 789 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 PCDHB7Q9Y5E2 793 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 PCDHA2Q9Y5H9 948 aa9.19□□□□□ -0.94
CSMD1-209ENST00000520630 KLRF2D3W0D1 207 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 GCOM1H8Y6P7 765 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-209ENST00000520630 LRRN2O75325 713 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 STAM2O75886 525 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 DCNP07585 359 aaKnown RBP9.18□□□□□ -0.94
CSMD1-209ENST00000520630 POLR2MP0CAP2 368 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 SRGAP2BP0DMP2 458 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 ITGB5P18084 799 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 LAG3P18627 525 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 NFX1Q12986 1120 aaKnown RBP9.18□□□□□ -0.94
CSMD1-209ENST00000520630 COL9A2Q14055 689 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-209ENST00000520630 MCMDC2Q4G0Z9 681 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 IER5Q5VY09 327 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 TMC7Q7Z402 723 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 TMEM173Q86WV6 379 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-209ENST00000520630 SLC39A11Q8N1S5 342 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 PLCD3Q8N3E9 789 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 ZSCAN10Q96SZ4 725 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-209ENST00000520630 ESYT1Q9BSJ8 1104 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 IL25Q9H293 177 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 ERAP1Q9NZ08 941 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 DBR1Q9UK59 544 aaKnown RBP9.18□□□□□ -0.94
CSMD1-209ENST00000520630 ST3GAL5Q9UNP4 418 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 DMXL2Q8TDJ6 3036 aa9.18□□□□□ -0.94
CSMD1-209ENST00000520630 SETXQ7Z333 2677 aaKnown RBP9.18□□□□□ -0.94
CSMD1-209ENST00000520630 ANKRD11Q6UB99 2663 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-209ENST00000520630 DCDC2BA2VCK2 349 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 NT5C1B-RDH14C9J2C7 533 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 MEIS2O14770 477 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 DHX16O60231 1041 aaKnown RBP9.17□□□□□ -0.94
CSMD1-209ENST00000520630 ADRB1P08588 477 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 CFHP08603 1231 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 PCP11498 1178 aaKnown RBP9.17□□□□□ -0.94
CSMD1-209ENST00000520630 KRT76Q01546 638 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 NMIQ13287 307 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-209ENST00000520630 PLCB4Q15147 1175 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 GNPTABQ3T906 1256 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 CLLU1OSQ5K130 101 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 PCNX4Q63HM2 1172 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 USP17L6PQ6QN14 398 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 TMC5Q6UXY8 1006 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 SLC24A5Q71RS6 500 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 FAM228AQ86W67 206 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 KIAA0319LQ8IZA0 1049 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 BCL7CQ8WUZ0 217 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-209ENST00000520630 SEPT1Q8WYJ6 367 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 ESR2Q92731 530 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 VN1R3Q9BXE9 311 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 KAT14Q9H8E8 782 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 SENP2Q9HC62 589 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 RNF216Q9NWF9 866 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-209ENST00000520630 TMEM161AQ9NX61 479 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 WNT16Q9UBV4 365 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 RBM19Q9Y4C8 960 aaKnown RBP9.17□□□□□ -0.94
CSMD1-209ENST00000520630 NUP205Q92621 2012 aa9.17□□□□□ -0.94
CSMD1-209ENST00000520630 PKD1L2Q7Z442 2459 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 F5P12259 2224 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 CEP295Q9C0D2 2601 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 SMIM35A0A1B0GVV1 85 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 RRN3P2A6NIE6 340 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 ZBTB42B2RXF5 422 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 MFAP1P55081 439 aaKnown RBP9.16□□□□□ -0.94
CSMD1-209ENST00000520630 SMC1AQ14683 1233 aaKnown RBP9.16□□□□□ -0.94
CSMD1-209ENST00000520630 WTAPQ15007 396 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 ATAT1Q5SQI0 421 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 MTHFD1LQ6UB35 978 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 CYB5R4Q7L1T6 521 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 GPR149Q86SP6 731 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 TICAM2Q86XR7 235 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 HOMER1Q86YM7 354 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 ZBP1Q9H171 429 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 SMARCAD1Q9H4L7 1026 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 ELAC1Q9H777 363 aaKnown RBP9.16□□□□□ -0.94
CSMD1-209ENST00000520630 TBC1D17Q9HA65 648 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 PARD6AQ9NPB6 346 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms