RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 VCAM1P19320 739 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 HNRNPH3P31942 346 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 NNTQ13423 1086 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 PLS1Q14651 629 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 IL17AQ16552 155 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 CCDC96Q2M329 555 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 NCAPH2Q6IBW4 605 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 SV2BQ7L1I2 683 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 DPP9Q86TI2 863 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 MMGT1Q8N4V1 131 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 NOA1Q8NC60 698 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 NPLOC4Q8TAT6 608 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 FAM76AQ8TAV0 307 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 GTF3C2Q8WUA4 911 aaPredicted RBP9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 USP6NLQ92738 828 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 GPKOWQ92917 476 aaPredicted RBP eCLIP9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 PURBQ96QR8 312 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 MTRQ99707 1265 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 IFIH1Q9BYX4 1025 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 TRIM9Q9C026 710 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 TANGO6Q9C0B7 1094 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 TTYH3Q9C0H2 523 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 ZMYND12Q9H0C1 365 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 RPAP3Q9H6T3 665 aaPredicted RBP9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 FAM204AQ9H8W3 233 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 RIC8AQ9NPQ8 531 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 JADE2Q9NQC1 790 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 BTBD7Q9P203 1132 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 SERPINB13Q9UIV8 391 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 FAM184BQ9ULE4 1060 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 STXBP5LQ9Y2K9 1186 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 REXO2Q9Y3B8 237 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 RABGAP1Q9Y3P9 1069 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 KDM3AQ9Y4C1 1321 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 PALM3A6NDB9 673 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 TRIM49BA6NDI0 452 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 GOLGA6BA6NDN3 693 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 GNA14O95837 355 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 ATP1A1P05023 1023 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 TNFRSF8P28908 595 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 EPHB4P54760 987 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 PPFIA1Q13136 1202 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 INF2Q27J81 1249 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 VWA3BQ502W6 1294 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 GLE1Q53GS7 698 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 NAALADL2Q58DX5 795 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 RCSD1Q6JBY9 416 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 EMBQ6PCB8 327 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 CATSPERGQ6ZRH7 1159 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 UNC13DQ70J99 1090 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 SRLQ86TD4 932 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 IRF2BP1Q8IU81 584 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 REXO1Q8N1G1 1221 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 GUF1Q8N442 669 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 RNF10Q8N5U6 811 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 CHP1Q99653 195 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 SH2D4AQ9H788 454 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 DDX20Q9UHI6 824 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 MAD2L2Q9UI95 211 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 HPCAL4Q9UM19 191 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 SNX12Q9UMY4 172 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 MAPK8IP1Q9UQF2 711 aa9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 RRP15Q9Y3B9 282 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-223ENST00000520520 SSU72P8A0A1W2PR75 194 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 SLC15A5A6NIM6 579 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 SPDYE16A6NNV3 312 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 KLRF2D3W0D1 207 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 RAD21O60216 631 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 AKR1B10O60218 316 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 NMT2O60551 498 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 CCNT1O60563 726 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 HSF2BPO75031 334 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 PPFIA4O75335 1185 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 LCA5LO95447 670 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 CYP2D6P10635 497 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 CDC25AP30304 524 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 RTP1P59025 263 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 CALCRLQ16602 461 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 ASPRV1Q53RT3 343 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 PRAMEF19Q5SWL8 479 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 ALS2CLQ60I27 953 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 GPR153Q6NV75 609 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 TATDN1Q6P1N9 297 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 WDR59Q6PJI9 974 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 CACNA2D4Q7Z3S7 1137 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 CLEC10AQ8IUN9 316 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 TRPV1Q8NER1 839 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 PPM1EQ8WY54 764 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 SYN2Q92777 582 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 NOX5Q96PH1 765 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 DUSP9Q99956 384 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 SELENOOQ9BVL4 669 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 GLT8D2Q9H1C3 349 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 GINM1Q9NU53 330 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 STX8Q9UNK0 236 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 ARIH1Q9Y4X5 557 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 PLIN4Q96Q06 1357 aa9.48□□□□□ -0.89
CTNNA1-223ENST00000520520 GRID2IPA4D2P6 1211 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 GOLGA6CA6NDK9 693 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 SMCO2A6NFE2 343 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms