RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 NPEPPSP55786 919 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 PLCB2Q00722 1185 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 RAD51AP2Q09MP3 1159 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 PSMD2Q13200 908 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 STIM1Q13586 685 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 TARBP2Q15633 366 aaKnown RBP9.45□□□□□ -0.9
VAPB-206ENST00000520497 XKR9Q5GH70 373 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 FAM26FQ5R3K3 315 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 MFSD14CQ5VZR4 134 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 TLK2Q86UE8 772 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 LUZP1Q86V48 1076 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 TRIM50Q86XT4 487 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 DHX40Q8IX18 779 aaKnown RBP9.45□□□□□ -0.9
VAPB-206ENST00000520497 ADSSL1Q8N142 457 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 OR6J1Q8NGC5 347 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 PXYLP1Q8TE99 480 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 AFG1LQ8WV93 481 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 BBXQ8WY36 941 aaPredicted RBP9.45□□□□□ -0.9
VAPB-206ENST00000520497 FAM167AQ96KS9 214 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 MED15Q96RN5 788 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 FIZ1Q96SL8 496 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 TIPINQ9BVW5 301 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 SMARCAD1Q9H4L7 1026 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 AZI2Q9H6S1 392 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 CYP26B1Q9NR63 512 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 OLFML3Q9NRN5 406 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 PANK4Q9NVE7 773 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 SEL1LQ9UBV2 794 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 SEPT9Q9UHD8 586 aaPredicted RBP9.45□□□□□ -0.9
VAPB-206ENST00000520497 FAM184BQ9ULE4 1060 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 PPME1Q9Y570 386 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 PTCH2Q9Y6C5 1203 aa9.45□□□□□ -0.9
VAPB-206ENST00000520497 CITO14578 2027 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 ZBTB42B2RXF5 422 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 ADCY3O60266 1144 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 HIP1RO75146 1068 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 DUSP11O75319 330 aaKnown RBP9.44□□□□□ -0.9
VAPB-206ENST00000520497 TBCAO75347 108 aaKnown RBP9.44□□□□□ -0.9
VAPB-206ENST00000520497 DGAT1O75907 488 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 HMGCRP04035 888 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 KRT18P05783 430 aaKnown RBP9.44□□□□□ -0.9
VAPB-206ENST00000520497 TPM3P06753 285 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 GAP43P17677 238 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 PRMT2P55345 433 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 NKX3-2P78367 333 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 MYL5Q02045 173 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 CACNB2Q08289 660 aaPredicted RBP9.44□□□□□ -0.9
VAPB-206ENST00000520497 TRIM32Q13049 653 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 NCAPHQ15003 741 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 PLCB4Q15147 1175 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 DGKDQ16760 1214 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 MAP3K21Q5TCX8 1036 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 EPM2AIP1Q7L775 607 aaPredicted RBP9.44□□□□□ -0.9
VAPB-206ENST00000520497 SFR1Q86XK3 245 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 GUF1Q8N442 669 aaKnown RBP9.44□□□□□ -0.9
VAPB-206ENST00000520497 AOPEPQ8N6M6 819 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 GLIS3Q8NEA6 775 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 ATP8B4Q8TF62 1192 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 HPS3Q969F9 1004 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 LENG1Q96BZ8 264 aaPredicted RBP9.44□□□□□ -0.9
VAPB-206ENST00000520497 CEP170P1Q96L14 293 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 CCDC43Q96MW1 224 aaKnown RBP9.44□□□□□ -0.9
VAPB-206ENST00000520497 PPP1R9BQ96SB3 815 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 SH2D3AQ9BRG2 576 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 C16orf70Q9BSU1 422 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 FGFBP2Q9BYJ0 223 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 UPF3AQ9H1J1 476 aaKnown RBP9.44□□□□□ -0.9
VAPB-206ENST00000520497 HSD3B7Q9H2F3 369 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 DHX33Q9H6R0 707 aaKnown RBP9.44□□□□□ -0.9
VAPB-206ENST00000520497 PARVGQ9HBI0 331 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 SLC39A2Q9NP94 309 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 XPNPEP1Q9NQW7 623 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 ERAP1Q9NZ08 941 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 COL4A3BPQ9Y5P4 624 aa9.44□□□□□ -0.9
VAPB-206ENST00000520497 KIAA0100Q14667 2235 aaKnown RBP9.44□□□□□ -0.9
VAPB-206ENST00000520497 SYNRGQ9UMZ2 1314 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 SEPT4O43236 478 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 FAM13AO94988 1023 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 ZNF286BP0CG31 522 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 ELNP15502 786 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 ARHGEF6Q15052 776 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 MTERF2Q49AM1 385 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 HERC4Q5GLZ8 1057 aaPredicted RBP9.43□□□□□ -0.9
VAPB-206ENST00000520497 FOXR2Q6PJQ5 311 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 MCPH1Q8NEM0 835 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 ENOX1Q8TC92 643 aaKnown RBP9.43□□□□□ -0.9
VAPB-206ENST00000520497 SH3TC2Q8TF17 1288 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 GLG1Q92896 1179 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 DRC1Q96MC2 740 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 ATP6V0A4Q9HBG4 840 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 NRBP2Q9NSY0 501 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 RWDD2AQ9UIY3 292 aa9.43□□□□□ -0.9
VAPB-206ENST00000520497 COL1A2P08123 1366 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 IGKV6-21A0A0C4DH24 114 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 SFI1A8K8P3 1242 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 PSMA7O14818 248 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 DYNC1LI2O43237 492 aaPredicted RBP9.42□□□□□ -0.9
VAPB-206ENST00000520497 CBFA2T2O43439 604 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 HBP1O60381 514 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 PPP1R37O75864 691 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms