RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 PRUNE2Q8WUY3 3088 aa18.18■□□□□ 0.5
IGHV3-42-201ENST00000520410 CHD7Q9P2D1 2997 aa18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 MGEA5O60502 916 aa18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 CCNT1O60563 726 aaKnown RBP18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 ZSCAN20P17040 1043 aaPredicted RBP18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 SSTR3P32745 418 aaPredicted RBP18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 PIK3AP1Q6ZUJ8 805 aa18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 FAM228AQ86W67 206 aa18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 WASF1Q92558 559 aa18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 SH2D3AQ9BRG2 576 aa18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 LMAN2LQ9H0V9 348 aa18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 ATP6V0A4Q9HBG4 840 aa18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 BRMS1Q9HCU9 246 aa18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 ORC3Q9UBD5 711 aaPredicted RBP18.17■□□□□ 0.5
IGHV3-42-201ENST00000520410 DDX11L8A8MPP1 907 aa18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 C5orf67F2Z3F1 127 aa18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 ZNF862O60290 1169 aa18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 PFKFB2O60825 505 aa18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 CENPBP07199 599 aaPredicted RBP18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 CLUL1Q15846 466 aa18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 PTCRAQ6ISU1 281 aaPredicted RBP18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 NEK8Q86SG6 692 aa18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 ABI1Q8IZP0 508 aa18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 NECAB1Q8N987 351 aa18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 PPP2R3CQ969Q6 453 aa18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 RC3H2Q9HBD1 1191 aaKnown RBP18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 GJB4Q9NTQ9 266 aa18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 STK36Q9NRP7 1315 aa18.16■□□□□ 0.5
IGHV3-42-201ENST00000520410 TMEM150BA6NC51 233 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 SLC37A4O43826 429 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 PSMD10O75832 226 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 ANAPC15P60006 121 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 LEXMQ3ZCV2 418 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 SLC24A5Q71RS6 500 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 RDM1Q8NG50 284 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 MICAL1Q8TDZ2 1067 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 CLP1Q92989 425 aaKnown RBP18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 PHF20Q9BVI0 1012 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 PLVAPQ9BX97 442 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 AAASQ9NRG9 546 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 RGS18Q9NS28 235 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 PCDHB12Q9Y5F1 795 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 LOXHD1Q8IVV2 1947 aa18.15■□□□□ 0.5
IGHV3-42-201ENST00000520410 MYH9P35579 1960 aaKnown RBP18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 EDIL3O43854 480 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 EIF5BO60841 1220 aaKnown RBP18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 GPR32O75388 356 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 MMP1P03956 469 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 FGFR1P11362 822 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 IL9P15248 144 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 FGFR4P22455 802 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 KRT2P35908 639 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 DNM2P50570 870 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 TRIM29Q14134 588 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 XKR3Q5GH77 459 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 FAM102BQ5T8I3 360 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 ERICH6BQ5W0A0 696 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 NCAPH2Q6IBW4 605 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 THNSL1Q8IYQ7 743 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 FAM177A1Q8N128 213 aaPredicted RBP18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 KLHL23Q8NBE8 558 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 PABPC5Q96DU9 382 aaKnown RBP18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 FAM50BQ9Y247 325 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 A0A0C4DFX4 3053 aa18.14■□□□□ 0.49
IGHV3-42-201ENST00000520410 CYP3A7-CYP3A51PA0A087WV96 503 aa18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 M0R2N6 131 aa18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 CYP3A7P24462 503 aa18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 GPC3P51654 580 aa18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 NEK4P51957 841 aa18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 NPY5RQ15761 445 aa18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 PLA2G4FQ68DD2 849 aa18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 MOXD1Q6UVY6 613 aa18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 ETNPPLQ8TBG4 499 aa18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 OXER1Q8TDS5 423 aa18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 POF1BQ8WVV4 589 aa18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 NAP1L4Q99733 375 aaKnown RBP18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 BMP2KQ9NSY1 1161 aaPredicted RBP18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 PLAGL2Q9UPG8 496 aa18.13■□□□□ 0.49
IGHV3-42-201ENST00000520410 BAG4O95429 457 aaKnown RBP18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 ITGB1P05556 798 aa18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 LINC00271P0C7V0 271 aa18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 GCFC2P16383 781 aaKnown RBP18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 EIF4BP23588 611 aaKnown RBP18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 CA8P35219 290 aa18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 NDUFV1P49821 464 aa18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 PSMC5P62195 406 aa18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 RBM23Q86U06 439 aaKnown RBP18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 RHPN2Q8IUC4 686 aa18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 P2RX5Q93086 422 aa18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 NLRP4Q96MN2 994 aa18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 GCOM2Q9BZD3 368 aaPredicted RBP18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 TMEM161AQ9NX61 479 aa18.12■□□□□ 0.49
IGHV3-42-201ENST00000520410 CUL9Q8IWT3 2517 aa18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 C9IYK1 514 aa18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 HOXA2O43364 376 aa18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 NCK2O43639 380 aa18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 DKC1O60832 514 aaKnown RBP eCLIP18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 CSDE1O75534 798 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms