RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 HDXQ7Z353 690 aa28.18■■■□□ 2.1
COL13A1-213ENST00000520267 TAAR1Q96RJ0 339 aa28.18■■■□□ 2.1
COL13A1-213ENST00000520267 PSMB7Q99436 277 aa28.18■■■□□ 2.1
COL13A1-213ENST00000520267 PACSIN1Q9BY11 444 aa28.18■■■□□ 2.1
COL13A1-213ENST00000520267 LUC7LQ9NQ29 371 aaKnown RBP28.18■■■□□ 2.1
COL13A1-213ENST00000520267 GCNT4Q9P109 453 aa28.18■■■□□ 2.1
COL13A1-213ENST00000520267 KLRC1P26715 233 aa28.17■■■□□ 2.1
COL13A1-213ENST00000520267 MTMR2Q13614 643 aa28.17■■■□□ 2.1
COL13A1-213ENST00000520267 NAB2Q15742 525 aa28.17■■■□□ 2.1
COL13A1-213ENST00000520267 ZNF571Q7Z3V5 609 aaPredicted RBP28.17■■■□□ 2.1
COL13A1-213ENST00000520267 TLR10Q9BXR5 811 aa28.17■■■□□ 2.1
COL13A1-213ENST00000520267 AGPAT3Q9NRZ7 376 aa28.17■■■□□ 2.1
COL13A1-213ENST00000520267 VCAM1P19320 739 aa28.17■■■□□ 2.1
COL13A1-213ENST00000520267 OAS2P29728 719 aaKnown RBP28.17■■■□□ 2.1
COL13A1-213ENST00000520267 CXCR5P32302 372 aa28.17■■■□□ 2.1
COL13A1-213ENST00000520267 GJB7Q6PEY0 223 aa28.17■■■□□ 2.1
COL13A1-213ENST00000520267 PADI6Q6TGC4 694 aa28.17■■■□□ 2.1
COL13A1-213ENST00000520267 PPP1R9AQ9ULJ8 1098 aa28.17■■■□□ 2.1
COL13A1-213ENST00000520267 POLR3GO15318 223 aaPredicted RBP28.16■■■□□ 2.1
COL13A1-213ENST00000520267 P4HBP07237 508 aaKnown RBP28.16■■■□□ 2.1
COL13A1-213ENST00000520267 TCP1P17987 556 aaKnown RBP28.16■■■□□ 2.1
COL13A1-213ENST00000520267 STXBP4Q6ZWJ1 553 aa28.16■■■□□ 2.1
COL13A1-213ENST00000520267 MICALL2Q8IY33 904 aa28.16■■■□□ 2.1
COL13A1-213ENST00000520267 EIF2AK2P19525 551 aaKnown RBP28.16■■■□□ 2.1
COL13A1-213ENST00000520267 KIAA0753Q2KHM9 967 aa28.16■■■□□ 2.1
COL13A1-213ENST00000520267 TBC1D10BQ4KMP7 808 aaPredicted RBP28.16■■■□□ 2.1
COL13A1-213ENST00000520267 MAEAQ7L5Y9 396 aa28.16■■■□□ 2.1
COL13A1-213ENST00000520267 STRA6Q9BX79 667 aa28.16■■■□□ 2.1
COL13A1-213ENST00000520267 DMAC2Q9NW81 257 aa28.16■■■□□ 2.1
COL13A1-213ENST00000520267 HACL1Q9UJ83 578 aa28.16■■■□□ 2.1
COL13A1-213ENST00000520267 ZHX2Q9Y6X8 837 aa28.16■■■□□ 2.1
COL13A1-213ENST00000520267 GTPBP10A4D1E9 387 aaKnown RBP28.15■■■□□ 2.1
COL13A1-213ENST00000520267 RPS12P25398 132 aaKnown RBP28.15■■■□□ 2.1
COL13A1-213ENST00000520267 GMPSP49915 693 aaPredicted RBP28.15■■■□□ 2.1
COL13A1-213ENST00000520267 CYP2J2P51589 502 aa28.15■■■□□ 2.1
COL13A1-213ENST00000520267 RPS6P62753 249 aaKnown RBP28.15■■■□□ 2.1
COL13A1-213ENST00000520267 HS2ST1Q7LGA3 356 aa28.15■■■□□ 2.1
COL13A1-213ENST00000520267 ZNF572Q7Z3I7 529 aaPredicted RBP28.15■■■□□ 2.1
COL13A1-213ENST00000520267 MKNK1Q9BUB5 465 aa28.15■■■□□ 2.1
COL13A1-213ENST00000520267 RPAP3Q9H6T3 665 aaPredicted RBP28.15■■■□□ 2.1
COL13A1-213ENST00000520267 FBXL5Q9UKA1 691 aa28.15■■■□□ 2.1
COL13A1-213ENST00000520267 TARSL2A2RTX5 802 aaKnown RBP28.15■■■□□ 2.1
COL13A1-213ENST00000520267 JAM2P57087 298 aa28.15■■■□□ 2.1
COL13A1-213ENST00000520267 MTMR1Q13613 665 aa28.15■■■□□ 2.1
COL13A1-213ENST00000520267 NBPF12Q5TAG4 269 aaPredicted RBP28.15■■■□□ 2.1
COL13A1-213ENST00000520267 ZCCHC17Q9NP64 241 aaKnown RBP28.15■■■□□ 2.1
COL13A1-213ENST00000520267 GINM1Q9NU53 330 aa28.15■■■□□ 2.1
COL13A1-213ENST00000520267 PALMO75781 387 aa28.14■■■□□ 2.1
COL13A1-213ENST00000520267 PPP1R37O75864 691 aa28.14■■■□□ 2.1
COL13A1-213ENST00000520267 PLS1Q14651 629 aa28.14■■■□□ 2.1
COL13A1-213ENST00000520267 IQCEQ6IPM2 695 aa28.14■■■□□ 2.1
COL13A1-213ENST00000520267 SMARCAL1Q9NZC9 954 aa28.14■■■□□ 2.1
COL13A1-213ENST00000520267 EHD2Q9NZN4 543 aa28.14■■■□□ 2.1
COL13A1-213ENST00000520267 SAMM50Q9Y512 469 aa28.14■■■□□ 2.1
COL13A1-213ENST00000520267 PPP1R12BO60237 982 aaPredicted RBP28.13■■■□□ 2.09
COL13A1-213ENST00000520267 SPP2Q13103 211 aa28.13■■■□□ 2.09
COL13A1-213ENST00000520267 PGM5Q15124 567 aa28.13■■■□□ 2.09
COL13A1-213ENST00000520267 BZW2Q9Y6E2 419 aaKnown RBP28.13■■■□□ 2.09
COL13A1-213ENST00000520267 PARP14Q460N5 1801 aa28.13■■■□□ 2.09
COL13A1-213ENST00000520267 H3BQF6 201 aa28.12■■■□□ 2.09
COL13A1-213ENST00000520267 ZMYND10O75800 440 aa28.12■■■□□ 2.09
COL13A1-213ENST00000520267 PRKCIP41743 596 aa28.12■■■□□ 2.09
COL13A1-213ENST00000520267 FMO5P49326 533 aa28.12■■■□□ 2.09
COL13A1-213ENST00000520267 CASP8Q14790 479 aa28.12■■■□□ 2.09
COL13A1-213ENST00000520267 MMGT1Q8N4V1 131 aa28.12■■■□□ 2.09
COL13A1-213ENST00000520267 WNK4Q96J92 1243 aa28.12■■■□□ 2.09
COL13A1-213ENST00000520267 MAP3K20Q9NYL2 800 aaKnown RBP28.12■■■□□ 2.09
COL13A1-213ENST00000520267 PPP1R1BQ9UD71 204 aaPredicted RBP28.12■■■□□ 2.09
COL13A1-213ENST00000520267 FRMD4BQ9Y2L6 1034 aa28.12■■■□□ 2.09
COL13A1-213ENST00000520267 MYCLP12524 364 aaPredicted RBP28.12■■■□□ 2.09
COL13A1-213ENST00000520267 SPATA4Q8NEY3 305 aa28.12■■■□□ 2.09
COL13A1-213ENST00000520267 TRERF1Q96PN7 1200 aa28.12■■■□□ 2.09
COL13A1-213ENST00000520267 CNOT7Q9UIV1 285 aaKnown RBP28.12■■■□□ 2.09
COL13A1-213ENST00000520267 DBR1Q9UK59 544 aaKnown RBP28.12■■■□□ 2.09
COL13A1-213ENST00000520267 CTDP1Q9Y5B0 961 aaPredicted RBP28.12■■■□□ 2.09
COL13A1-213ENST00000520267 GJA3Q9Y6H8 435 aa28.12■■■□□ 2.09
COL13A1-213ENST00000520267 DOCK1Q14185 1865 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 K7ENM7 598 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 ZBED4O75132 1171 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 QARSP47897 775 aaKnown RBP28.11■■■□□ 2.09
COL13A1-213ENST00000520267 RARRES1P49788 294 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 SYCP3Q8IZU3 236 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 PDE11AQ9HCR9 933 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 ITIH3Q06033 890 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 CBWD6Q4V339 395 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 CBWD3Q5JTY5 395 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 CBWD5Q5RIA9 395 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 DNAAF5Q86Y56 855 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 ZBTB9Q96C00 473 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 SH2D3AQ9BRG2 576 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 PCDHGC5Q9Y5F6 944 aa28.11■■■□□ 2.09
COL13A1-213ENST00000520267 FTCDO95954 541 aa28.1■■■□□ 2.09
COL13A1-213ENST00000520267 TRIM49P0CI25 452 aa28.1■■■□□ 2.09
COL13A1-213ENST00000520267 TRIM49CP0CI26 452 aa28.1■■■□□ 2.09
COL13A1-213ENST00000520267 MCM3P25205 808 aa28.1■■■□□ 2.09
COL13A1-213ENST00000520267 ZNF771Q7L3S4 317 aaPredicted RBP28.1■■■□□ 2.09
COL13A1-213ENST00000520267 ATG4CQ96DT6 458 aa28.1■■■□□ 2.09
COL13A1-213ENST00000520267 RMDN3Q96TC7 470 aa28.1■■■□□ 2.09
COL13A1-213ENST00000520267 TBC1D22BQ9NU19 505 aa28.1■■■□□ 2.09
COL13A1-213ENST00000520267 ATP9AO75110 1047 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms