RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PRAMEF18Q5VWM3 479 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 MBNL2Q5VZF2 373 aaKnown RBP6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 CD276Q5ZPR3 534 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 SLFN12LQ6IEE8 588 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 RPTNQ6XPR3 784 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 CERS3Q8IU89 383 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 SIRT2Q8IXJ6 389 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 FLAD1Q8NFF5 587 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 SVIPQ8NHG7 77 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 SLC35G2Q8TBE7 412 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 CALML6Q8TD86 181 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 TTC17Q96AE7 1141 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 RNF32Q9H0A6 362 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 ARHGAP28Q9P2N2 729 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 TMPRSS11EQ9UL52 423 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 COMMD10Q9Y6G5 202 aa6.84□□□□□ -1.31
HMGB1P46-201ENST00000520062 LOC102724159A0A0B4J2E5 919 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 ABLIM1O14639 778 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 MPIG6BO95866 241 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 WNT11O96014 354 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 LRG1P02750 347 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 PFKMP08237 780 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 OSMP13725 252 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 PHKG2P15735 406 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 AFMP43652 599 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 BCAR1P56945 870 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 OS9Q13438 667 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 RAB3GAP1Q15042 981 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 PWP2Q15269 919 aaKnown RBP6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 ZNF792Q3KQV3 632 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 ATAT1Q5SQI0 421 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 PRAMEF9Q5VWM5 478 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 ETV3LQ6ZN32 361 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 AMIGO3Q86WK7 504 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 TP53INP2Q8IXH6 220 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 EXOC8Q8IYI6 725 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 RPGRQ92834 1020 aaKnown RBP6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 LRGUKQ96M69 825 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 TAAR9Q96RI9 348 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 SLC6A17Q9H1V8 727 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 KCTD10Q9H3F6 313 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 DENND2AQ9ULE3 1009 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 EDARQ9UNE0 448 aa6.83□□□□□ -1.32
HMGB1P46-201ENST00000520062 NUDT19A8MXV4 375 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 HRKO00198 91 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 APOL3O95236 402 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 POU2F2P09086 479 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 ENO2P09104 434 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 GALK1P51570 392 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 SPIDRQ14159 915 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 GRM3Q14832 879 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 BRD3Q15059 726 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 PLEKHN1Q494U1 663 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 CCDC178Q5BJE1 867 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 SYCP2LQ5T4T6 812 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 ZC3H14Q6PJT7 736 aaKnown RBP6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 TEPPQ6URK8 271 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 LYSMD2Q8IV50 215 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 SLC41A1Q8IVJ1 513 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 SMC5Q8IY18 1101 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 THEMISQ8N1K5 641 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 PJA1Q8NG27 643 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 OR14C36Q8NHC7 312 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 HPS3Q969F9 1004 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 TIFAQ96CG3 184 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 INTS4Q96HW7 963 aaKnown RBP6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 RNF38Q9H0F5 515 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 IFT122Q9HBG6 1241 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 INCENPQ9NQS7 918 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 MAN1C1Q9NR34 630 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 TUBD1Q9UJT1 453 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 WASF3Q9UPY6 502 aa6.82□□□□□ -1.32
HMGB1P46-201ENST00000520062 FRMPD2Q68DX3 1309 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 ANO9A1A5B4 782 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 ZNF839A8K0R7 811 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 NFIBO00712 420 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 AP1G1O43747 822 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 MAFO75444 373 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 LPLP06858 475 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 MC4RP32245 332 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 GPR15P49685 360 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 SLC16A1P53985 500 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 YBX1P67809 324 aaKnown RBP6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 VPS72Q15906 364 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 ADGRF1Q5T601 910 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 OLFML2BQ68BL8 750 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 CYB5RLQ6IPT4 315 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 LILRA6Q6PI73 481 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 CHST15Q7LFX5 561 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 FAM43AQ8N2R8 423 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 IGDCC4Q8TDY8 1250 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 FAM193BQ96PV7 902 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 PITHD1Q9GZP4 211 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 DDX21Q9NR30 783 aaKnown RBP eCLIP6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 CHST12Q9NRB3 414 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 UCKL1Q9NWZ5 548 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 GALNT8Q9NY28 637 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 KLHL14Q9P2G3 628 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 SAP30BPQ9UHR5 308 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms