RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 CNTNAP3BQ96NU0 1288 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 TRMT61BQ9BVS5 477 aaKnown RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 CNTNAP3Q9BZ76 1288 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 PRKRIP1Q9H875 184 aaPredicted RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 NDRG2Q9UN36 371 aaKnown RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 YBX2Q9Y2T7 364 aaKnown RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 PCDHGA5Q9Y5G8 931 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 MYO7AQ13402 2215 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 BRWD1Q9NSI6 2320 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 GPR179Q6PRD1 2367 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 DDX11L8A8MPP1 907 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 SLC30A4O14863 429 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 ZC3H11AO75152 810 aaKnown RBP eCLIP3.2□□□□□ -1.92e-7■■■□□ 16.9
EFR3A-202ENST00000519656 FGF18O76093 207 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 ZNF853P0CG23 659 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 CKBP12277 381 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 ITGA4P13612 1032 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 RPS6P62753 249 aaKnown RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 CCDC157Q569K6 752 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 PHLDB3Q6NSJ2 640 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 TMC5Q6UXY8 1006 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 DGKHQ86XP1 1220 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 HS6ST3Q8IZP7 471 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 GMCL1P1Q8NEA9 526 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 KLHDC4Q8TBB5 520 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 RILPL2Q969X0 211 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 TBC1D22BQ9NU19 505 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 URB1O60287 2271 aaKnown RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 FER1L6Q2WGJ9 1857 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 H0YCG3 227 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 EOMESO95936 686 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 ADORA1P30542 326 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 OR1G1P47890 313 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 GLUD2P49448 558 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 ZNF200P98182 395 aaPredicted RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 ANKRD54Q6NXT1 300 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 KCNT2Q6UVM3 1135 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 C16orf86Q6ZW13 317 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 C1orf210Q8IVY1 113 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 KLHL23Q8NBE8 558 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 PPTC7Q8NI37 304 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 GPR152Q8TDT2 470 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 MRPS31Q92665 395 aaKnown RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 CCDC97Q96F63 343 aaPredicted RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 C17orf80Q9BSJ5 609 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 CCDC94Q9BW85 323 aaPredicted RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 CELF4Q9BZC1 486 aaKnown RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 ADAM7Q9H2U9 754 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 RWDD1Q9H446 243 aaPredicted RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 TMEM9BQ9NQ34 198 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 MTMR4Q9NYA4 1195 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 PLAGL2Q9UPG8 496 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 SCN7AQ01118 1682 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 F5P12259 2224 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 SBF1O95248 1867 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 DICER1Q9UPY3 1922 aaKnown RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 POTEB3A0JP26 581 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 CFHP08603 1231 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 SARSP49591 514 aaKnown RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 SERINC3Q13530 473 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 WTAPQ15007 396 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 COLEC12Q5KU26 742 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 POTEBQ6S5H4 581 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 PDZD4Q76G19 769 aaPredicted RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 VPS52Q8N1B4 723 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 TSPYL6Q8N831 410 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 VN1R2Q8NFZ6 395 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 HPS3Q969F9 1004 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 GPRASP2Q96D09 838 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 CCDC51Q96ER9 411 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 USP44Q9H0E7 712 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 IL1RAPL2Q9NP60 686 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 DDX4Q9NQI0 724 aaKnown RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 CHST12Q9NRB3 414 aa3.2□□□□□ -1.9
EFR3A-202ENST00000519656 NOC2LQ9Y3T9 749 aaKnown RBP3.2□□□□□ -1.9
EFR3A-202ENST00000519656 TTLL13PA6NNM8 815 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 MMP1P03956 469 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 DHPSP49366 369 aaPredicted RBP3.19□□□□□ -1.9
EFR3A-202ENST00000519656 METAP2P50579 478 aaKnown RBP eCLIP3.19□□□□□ -1.9
EFR3A-202ENST00000519656 EPHB3P54753 998 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 CNTN2Q02246 1040 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 PCBP1Q15365 356 aaKnown RBP eCLIP3.19□□□□□ -1.9
EFR3A-202ENST00000519656 USP41Q3LFD5 358 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 ARHGAP29Q52LW3 1261 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 WDR45BQ5MNZ6 344 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 ZNF574Q6ZN55 896 aaPredicted RBP3.19□□□□□ -1.9
EFR3A-202ENST00000519656 LPCAT2Q7L5N7 544 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 CCDC105Q8IYK2 499 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 THEM5Q8N1Q8 247 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 CEP76Q8TAP6 659 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 SDR42E1Q8WUS8 393 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 RIN2Q8WYP3 895 aaPredicted RBP3.19□□□□□ -1.9
EFR3A-202ENST00000519656 DDX27Q96GQ7 796 aaKnown RBP3.19□□□□□ -1.9
EFR3A-202ENST00000519656 PLEKHF1Q96S99 279 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 LRRC4CQ9HCJ2 640 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 TRIM35Q9UPQ4 493 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 PCDHB6Q9Y5E3 794 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 CDY2AQ9Y6F7 541 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 RGPD5Q99666 1765 aa3.19□□□□□ -1.9
EFR3A-202ENST00000519656 SPTAN1Q13813 2472 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms