RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 CEP131Q9UPN4 1083 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 GINS2Q9Y248 185 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 LAMA2P24043 3122 aaKnown RBP10.52□□□□□ -0.73
HDAC3-215ENST00000519474 MICAL3Q7RTP6 2002 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 COL6A3P12111 3177 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 ZBTB39O15060 712 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 RPS6KA5O75582 802 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 P4HBP07237 508 aaKnown RBP10.51□□□□□ -0.73
HDAC3-215ENST00000519474 LINC00271P0C7V0 271 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 FOSBP53539 338 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 PSMC5P62195 406 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 PRKCEQ02156 737 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 DRP2Q13474 957 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 DSC3Q14574 896 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 EPHA7Q15375 998 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 ANO5Q75V66 913 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 TMEM192Q8IY95 271 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 DIS3L2Q8IYB7 885 aaKnown RBP10.51□□□□□ -0.73
HDAC3-215ENST00000519474 LRRC71Q8N4P6 559 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 ZNF579Q8NAF0 562 aaKnown RBP10.51□□□□□ -0.73
HDAC3-215ENST00000519474 BANK1Q8NDB2 785 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 ZNF668Q96K58 619 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-215ENST00000519474 PPP1R16BQ96T49 567 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 NAP1L4Q99733 375 aaKnown RBP10.51□□□□□ -0.73
HDAC3-215ENST00000519474 LLPHQ9BRT6 129 aaKnown RBP10.51□□□□□ -0.73
HDAC3-215ENST00000519474 RGL1Q9NZL6 768 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 WRAP73Q9P2S5 460 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-215ENST00000519474 TTC3P53804 2025 aa10.51□□□□□ -0.73
HDAC3-215ENST00000519474 C9IYK1 514 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 H3BNC9 293 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 GPR182O15218 404 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 GTPBP6O43824 516 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-215ENST00000519474 SLITRK3O94933 977 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 BAG4O95429 457 aaKnown RBP10.5□□□□□ -0.73
HDAC3-215ENST00000519474 EIF4BP23588 611 aaKnown RBP10.5□□□□□ -0.73
HDAC3-215ENST00000519474 TMOD1P28289 359 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 BMPR1AP36894 532 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 QARSP47897 775 aaKnown RBP10.5□□□□□ -0.73
HDAC3-215ENST00000519474 NPEPPSP55786 919 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 GUCY1B3Q02153 619 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 SPIRE1Q08AE8 756 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 PAK2Q13177 524 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 MTERF2Q49AM1 385 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 FAM43BQ6ZT52 329 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-215ENST00000519474 FAM228AQ86W67 206 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 POTEDQ86YR6 584 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 MICALL1Q8N3F8 863 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 FIBCD1Q8N539 461 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 FBXO22Q8NEZ5 403 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 GDPD5Q8WTR4 605 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 ATXN2LQ8WWM7 1075 aaKnown RBP10.5□□□□□ -0.73
HDAC3-215ENST00000519474 SAMD11Q96NU1 681 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 MTMR9Q96QG7 549 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 OSMRQ99650 979 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 ADAM2Q99965 735 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 RC3H2Q9HBD1 1191 aaKnown RBP10.5□□□□□ -0.73
HDAC3-215ENST00000519474 BRMS1Q9HCU9 246 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 RGS18Q9NS28 235 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 PCDHA12Q9UN75 941 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 AKT3Q9Y243 479 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 WDR81Q562E7 1941 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 LOXHD1Q8IVV2 1947 aa10.5□□□□□ -0.73
HDAC3-215ENST00000519474 SIP14410 1827 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 PRRC2BQ5JSZ5 2229 aaKnown RBP10.49□□□□□ -0.73
HDAC3-215ENST00000519474 MARCH6O60337 910 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 MAFO75444 373 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-215ENST00000519474 RB1P06400 928 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 SARSP49591 514 aaKnown RBP10.49□□□□□ -0.73
HDAC3-215ENST00000519474 GPC3P51654 580 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 TBC1D8BQ0IIM8 1120 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 GPM6BQ13491 265 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 TRIM29Q14134 588 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 ODR4Q5SWX8 454 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 SLC24A5Q71RS6 500 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 NPAS4Q8IUM7 802 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 C4orf19Q8IY42 314 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 SLFN12Q8IYM2 578 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 ZNF710Q8N1W2 664 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 FBXO18Q8NFZ0 1043 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 CLP1Q92989 425 aaKnown RBP10.49□□□□□ -0.73
HDAC3-215ENST00000519474 DYDC2Q96IM9 177 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 ASB2Q96Q27 587 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 HSD17B14Q9BPX1 270 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 SH2B1Q9NRF2 756 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-215ENST00000519474 PCDHB7Q9Y5E2 793 aa10.49□□□□□ -0.73
HDAC3-215ENST00000519474 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-215ENST00000519474 C5orf67F2Z3F1 127 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 CSDE1O75534 798 aaKnown RBP10.48□□□□□ -0.73
HDAC3-215ENST00000519474 STAG3L1P0CL83 205 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 BMP1P13497 986 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 DARSP14868 501 aaKnown RBP10.48□□□□□ -0.73
HDAC3-215ENST00000519474 FGFR4P22455 802 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 TXKP42681 527 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 GATMP50440 423 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 MRPS5P82675 430 aaKnown RBP10.48□□□□□ -0.73
HDAC3-215ENST00000519474 CDC42EP1Q00587 391 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 TFF2Q03403 129 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 BTG3Q14201 252 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-215ENST00000519474 CTTNQ14247 550 aaKnown RBP10.48□□□□□ -0.73
HDAC3-215ENST00000519474 FAM102BQ5T8I3 360 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms