RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	TMEM174	Q8WUU8	243 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	GBP3	Q9H0R5	595 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	AGPAT3	Q9NRZ7	376 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	CTAGE15	A4D2H0	777 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	CCNE2	O96020	404 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	CTAGE8	P0CG41	777 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	ACTN1	P12814	892 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	HIRA	P54198	1017 aa	Predicted RBP	13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	TDRD12	Q587J7	1177 aa	Known RBP	13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	CTAGE6	Q86UF2	777 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	GPIHBP1	Q8IV16	184 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	SLC9A9	Q8IVB4	645 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	CTAGE4	Q8IX94	777 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	C4orf19	Q8IY42	314 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	FAM186B	Q8IYM0	893 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	GPC2	Q8N158	579 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	GOLGA5	Q8TBA6	731 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	ANKZF1	Q9H8Y5	726 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	SIX2	Q9NPC8	291 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	GGA3	Q9NZ52	723 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	SAMM50	Q9Y512	469 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	CAPN6	Q9Y6Q1	641 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	UTRN	P46939	3433 aa		13.56	□□□□□ -0.24
SPIDR-210	ENST00000519362	YWHAB	P31946	246 aa	Known RBP	13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	SFN	P31947	248 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	JAK3	P52333	1124 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	CBX1	P83916	185 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	KRT76	Q01546	638 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	RAPGEF1	Q13905	1077 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	MYBPC2	Q14324	1141 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	TMEM132B	Q14DG7	1078 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	SLC18A3	Q16572	532 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	UGCG	Q16739	394 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	SNRNP48	Q6IEG0	339 aa	Known RBP	13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	TMCO3	Q6UWJ1	677 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	GBP6	Q6ZN66	633 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	CATSPERG	Q6ZRH7	1159 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	IRF2BP2	Q7Z5L9	587 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	TXLNB	Q8N3L3	684 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	LARS	Q9P2J5	1176 aa	Known RBP	13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	RAB21	Q9UL25	225 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	JRKL	Q9Y4A0	524 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	FHOD1	Q9Y613	1164 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	WDR64	B1ANS9	1081 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	MAFG	O15525	162 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	PPP1R12B	O60237	982 aa	Predicted RBP	13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	TACC1	O75410	805 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	CCND2	P30279	289 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	PSMC5	P62195	406 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	ALCAM	Q13740	583 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	ASIC2	Q16515	512 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	TCERG1L	Q5VWI1	586 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	RNF10	Q8N5U6	811 aa	Known RBP	13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	FAM133A	Q8N9E0	248 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	RDM1	Q8NG50	284 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	GPRASP2	Q96D09	838 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	INPP4A	Q96PE3	977 aa	Predicted RBP	13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	SENP7	Q9BQF6	1050 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	TIPIN	Q9BVW5	301 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	MAF1	Q9H063	256 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	MLXIP	Q9HAP2	919 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	SALL4	Q9UJQ4	1053 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	AFG3L2	Q9Y4W6	797 aa		13.55	□□□□□ -0.24
SPIDR-210	ENST00000519362	MYH11	P35749	1972 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	TESPA1	A2RU30	521 aa	Predicted RBP	13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	POTEB2	H3BUK9	544 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	MOCS3	O95396	460 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	NR3C2	P08235	984 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	PLS3	P13797	630 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	PRLR	P16471	622 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	PRKCI	P41743	596 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	JAM2	P57087	298 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	KLHL30	Q0D2K2	578 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	BMS1	Q14692	1282 aa	Known RBP	13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	PPP2R5A	Q15172	486 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	MYPN	Q86TC9	1320 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	ST6GALNAC4	Q9H4F1	302 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	ANKEF1	Q9NU02	776 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	GCNT4	Q9P109	453 aa		13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	DICER1	Q9UPY3	1922 aa	Known RBP	13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362	BZW2	Q9Y6E2	419 aa	Known RBP	13.54	□□□□□ -0.24
SPIDR-210	ENST00000519362		A0A087X0T9	212 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	CCDC151	A5D8V7	595 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362		K7ENM7	598 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	BACH1	O14867	736 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	ATP8B1	O43520	1251 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	SRGAP2	O75044	1071 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	FAM228B	P0C875	321 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	FMO5	P49326	533 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	BRD3	Q15059	726 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	SUPT20HL1	Q3ZLR7	823 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	SH3D19	Q5HYK7	790 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	MAEA	Q7L5Y9	396 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	C12orf56	Q8IXR9	622 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	NOA1	Q8NC60	698 aa	Known RBP	13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	RBM46	Q8TBY0	533 aa	Known RBP	13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	NSUN6	Q8TEA1	469 aa	Known RBP	13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms