RNA–Protein interactions for RNA: ENST00000519276.1

UBLCP1-202, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 1,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-202ENST00000519276 USP53Q70EK8 1073 aa6.35□□□□□ -1.39
UBLCP1-202ENST00000519276 MRGPREQ86SM8 312 aa6.35□□□□□ -1.39
UBLCP1-202ENST00000519276 PTPRN2Q92932 1015 aa6.35□□□□□ -1.39
UBLCP1-202ENST00000519276 MPHOSPH9Q99550 1183 aa6.35□□□□□ -1.39
UBLCP1-202ENST00000519276 MRPL42Q9Y6G3 142 aaKnown RBP6.35□□□□□ -1.39
UBLCP1-202ENST00000519276 PMS2P1A4D2B8 440 aa6.34□□□□□ -1.39
UBLCP1-202ENST00000519276 RPS6KA4O75676 772 aa6.34□□□□□ -1.39
UBLCP1-202ENST00000519276 C6orf222P0C671 652 aaPredicted RBP6.34□□□□□ -1.39
UBLCP1-202ENST00000519276 ZNF362Q5T0B9 420 aaPredicted RBP6.34□□□□□ -1.39
UBLCP1-202ENST00000519276 MAMDC2Q7Z304 686 aaPredicted RBP6.34□□□□□ -1.39
UBLCP1-202ENST00000519276 HOMER1Q86YM7 354 aa6.34□□□□□ -1.39
UBLCP1-202ENST00000519276 HAS1Q92839 578 aa6.34□□□□□ -1.39
UBLCP1-202ENST00000519276 MRPL4Q9BYD3 311 aaKnown RBP6.34□□□□□ -1.39
UBLCP1-202ENST00000519276 TMA7Q9Y2S6 64 aaKnown RBP6.34□□□□□ -1.39
UBLCP1-202ENST00000519276 BLACEA4D250 179 aa6.33□□□□□ -1.4
UBLCP1-202ENST00000519276 ENPP3O14638 875 aa6.33□□□□□ -1.4
UBLCP1-202ENST00000519276 KCNQ2O43526 872 aa6.33□□□□□ -1.4
UBLCP1-202ENST00000519276 PDE6AP16499 860 aa6.33□□□□□ -1.4
UBLCP1-202ENST00000519276 ZNF662Q6ZS27 426 aa6.33□□□□□ -1.4
UBLCP1-202ENST00000519276 GAREM2Q75VX8 874 aa6.33□□□□□ -1.4
UBLCP1-202ENST00000519276 OTOP3Q7RTS5 596 aa6.33□□□□□ -1.4
UBLCP1-202ENST00000519276 RBM12BQ8IXT5 1001 aaKnown RBP6.33□□□□□ -1.4
UBLCP1-202ENST00000519276 UHMK1Q8TAS1 419 aaKnown RBP6.33□□□□□ -1.4
UBLCP1-202ENST00000519276 APPBP2Q92624 585 aa6.33□□□□□ -1.4
UBLCP1-202ENST00000519276 PHF20Q9BVI0 1012 aa6.33□□□□□ -1.4
UBLCP1-202ENST00000519276 JAM3Q9BX67 310 aa6.33□□□□□ -1.4
UBLCP1-202ENST00000519276 PLD2O14939 933 aa6.32□□□□□ -1.4
UBLCP1-202ENST00000519276 HMGCRP04035 888 aa6.32□□□□□ -1.4
UBLCP1-202ENST00000519276 TRIM61Q5EBN2 209 aa6.32□□□□□ -1.4
UBLCP1-202ENST00000519276 KCNT2Q6UVM3 1135 aa6.32□□□□□ -1.4
UBLCP1-202ENST00000519276 IFNL3Q8IZI9 196 aa6.32□□□□□ -1.4
UBLCP1-202ENST00000519276 ANKRD35Q8N283 1001 aa6.32□□□□□ -1.4
UBLCP1-202ENST00000519276 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.32□□□□□ -1.43e-9■■■■■ 83.1
UBLCP1-202ENST00000519276 FBXO10Q9UK96 956 aa6.32□□□□□ -1.4
UBLCP1-202ENST00000519276 TRAF5O00463 557 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 AQP7O14520 342 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 EFCAB14O75071 495 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 RFPL3O75679 317 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 LTFP02788 710 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 GPR85P60893 370 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 WDR72Q3MJ13 1102 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 FNDC3BQ53EP0 1204 aaKnown RBP6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 STRIP1Q5VSL9 837 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 LBX2Q6XYB7 198 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 C16orf86Q6ZW13 317 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 KIAA1683Q9H0B3 1180 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 NCOA5Q9HCD5 579 aaKnown RBP6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 FANCLQ9NW38 375 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 ASXL2Q76L83 1435 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 MSCO60682 206 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 NAT1P18440 290 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 TCEA2Q15560 299 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 LARP4Q71RC2 724 aaKnown RBP eCLIP6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 GSTCDQ8NEC7 633 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 LENG9Q96B70 501 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 CADPSQ9ULU8 1353 aa6.31□□□□□ -1.4
UBLCP1-202ENST00000519276 ASMTLO95671 621 aa6.3□□□□□ -1.4
UBLCP1-202ENST00000519276 EPHA5P54756 1037 aa6.3□□□□□ -1.4
UBLCP1-202ENST00000519276 SDE2Q6IQ49 451 aa6.3□□□□□ -1.4
UBLCP1-202ENST00000519276 CXXC5Q7LFL8 322 aaKnown RBP6.3□□□□□ -1.4
UBLCP1-202ENST00000519276 OR10A2Q9H208 303 aa6.3□□□□□ -1.4
UBLCP1-202ENST00000519276 TELO2Q9Y4R8 837 aa6.3□□□□□ -1.4
UBLCP1-202ENST00000519276 CDC45O75419 566 aa6.29□□□□□ -1.4
UBLCP1-202ENST00000519276 HSD3B2P26439 372 aa6.29□□□□□ -1.4
UBLCP1-202ENST00000519276 KCNQ1P51787 676 aa6.29□□□□□ -1.4
UBLCP1-202ENST00000519276 CNGB1Q14028 1251 aaPredicted RBP6.29□□□□□ -1.4
UBLCP1-202ENST00000519276 PLEKHG4Q58EX7 1191 aa6.29□□□□□ -1.4
UBLCP1-202ENST00000519276 SHCBP1Q8NEM2 672 aa6.29□□□□□ -1.4
UBLCP1-202ENST00000519276 TMEM176AQ96HP8 235 aa6.29□□□□□ -1.4
UBLCP1-202ENST00000519276 SLC39A2Q9NP94 309 aa6.29□□□□□ -1.4
UBLCP1-202ENST00000519276 TRAF6Q9Y4K3 522 aa6.29□□□□□ -1.4
UBLCP1-202ENST00000519276 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.28□□□□□ -1.4
UBLCP1-202ENST00000519276 PPP1R12AO14974 1030 aaPredicted RBP6.28□□□□□ -1.4
UBLCP1-202ENST00000519276 SLC26A4O43511 780 aa6.28□□□□□ -1.4
UBLCP1-202ENST00000519276 SCNN1GP51170 649 aa6.28□□□□□ -1.4
UBLCP1-202ENST00000519276 TOB2Q14106 344 aaPredicted RBP6.28□□□□□ -1.4
UBLCP1-202ENST00000519276 EIF4HQ15056 248 aaKnown RBP6.28□□□□□ -1.4
UBLCP1-202ENST00000519276 KIZQ2M2Z5 673 aa6.28□□□□□ -1.4
UBLCP1-202ENST00000519276 KIAA0907Q7Z7F0 614 aaPredicted RBP6.28□□□□□ -1.4
UBLCP1-202ENST00000519276 SLC7A14Q8TBB6 771 aa6.28□□□□□ -1.4
UBLCP1-202ENST00000519276 CLUHP3Q96NS8 147 aa6.28□□□□□ -1.4
UBLCP1-202ENST00000519276 SLC52A2Q9HAB3 445 aa6.28□□□□□ -1.4
UBLCP1-202ENST00000519276 ACOT7O00154 380 aa6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 SPIRE1Q08AE8 756 aa6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 TRIM68Q6AZZ1 485 aa6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 MICALCLQ6ZW33 695 aa6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 RHOUQ7L0Q8 258 aa6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 VRK3Q8IV63 474 aa6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 NDOR1Q9UHB4 597 aa6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 SFMBT1Q9UHJ3 866 aa6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 WNT9AO14904 365 aa6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 HGFACQ04756 655 aa6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 DBPQ10586 325 aaPredicted RBP6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 SLC25A43Q8WUT9 341 aaPredicted RBP6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 MAGEB10Q96LZ2 347 aaPredicted RBP6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 FEZ1Q99689 392 aa6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 ALG1Q9BT22 464 aa6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 AGO3Q9H9G7 860 aaKnown RBP6.27□□□□□ -1.41
UBLCP1-202ENST00000519276 TRIM39Q9HCM9 518 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms