RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 MAGEF1Q9HAY2 307 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 GDPD2Q9HCC8 539 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 VAV3Q9UKW4 847 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 CACNA1AO00555 2505 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 LAMA3Q16787 3333 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 MBLAC1A4D2B0 266 aaPredicted RBP8.48□□□□□ -1.05
SDCBP-206ENST00000519115 TMEM150BA6NC51 233 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 RRN3P2A6NIE6 340 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 ZBTB42B2RXF5 422 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 HBP1O60381 514 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 KINO60870 393 aaKnown RBP8.48□□□□□ -1.05
SDCBP-206ENST00000519115 ZNF202O95125 648 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 SFNP31947 248 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 SLC26A2P50443 739 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 FXR1P51114 621 aaKnown RBP eCLIP8.48□□□□□ -1.05
SDCBP-206ENST00000519115 RBL2Q08999 1139 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 PPP2R5CQ13362 524 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 MBTPS1Q14703 1052 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 ZNF174Q15697 407 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 ZSCAN23Q3MJ62 389 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 FOXD4L6Q3SYB3 417 aaPredicted RBP8.48□□□□□ -1.05
SDCBP-206ENST00000519115 NCAPH2Q6IBW4 605 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 PSRC1Q6PGN9 363 aaPredicted RBP8.48□□□□□ -1.05
SDCBP-206ENST00000519115 TRAF7Q6Q0C0 670 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 B3GNT9Q6UX72 402 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 FOXD4L3Q6VB84 417 aaPredicted RBP8.48□□□□□ -1.05
SDCBP-206ENST00000519115 OTOP2Q7RTS6 562 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 IGSF22Q8N9C0 903 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 IQUBQ8NA54 791 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 RDM1Q8NG50 284 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 DNAJB3Q8WWF6 145 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 LRCH3Q96II8 777 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 OSBPL7Q9BZF2 842 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 FTOQ9C0B1 505 aaKnown RBP eCLIP8.48□□□□□ -1.055e-6■□□□□ 9.5
SDCBP-206ENST00000519115 CLSTN2Q9H4D0 955 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 DACT1Q9NYF0 836 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 TMEM63CQ9P1W3 806 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 KCNH3Q9ULD8 1083 aa8.48□□□□□ -1.05
SDCBP-206ENST00000519115 MAFBQ9Y5Q3 323 aaPredicted RBP8.48□□□□□ -1.05
SDCBP-206ENST00000519115 POTEMA6NI47 508 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 ZBBXA8MT70 800 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 RSPH10B2B2RC85 870 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 NBNO60934 754 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 FGBP02675 491 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 OATP04181 439 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 OR52Z1P0C646 297 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 SLFN14P0C7P3 912 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 RSPH10BP0C881 870 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 TXLNAP40222 546 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 TXKP42681 527 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 SYKP43405 635 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 CYP4A11Q02928 519 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 CEBPZQ03701 1054 aaKnown RBP8.47□□□□□ -1.05
SDCBP-206ENST00000519115 SPIRE1Q08AE8 756 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 TMEM62Q0P6H9 643 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 GPNMBQ14956 572 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 TMEM266Q2M3C6 531 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 FAM109BQ6ICB4 259 aaPredicted RBP8.47□□□□□ -1.05
SDCBP-206ENST00000519115 CAVIN1Q6NZI2 390 aaKnown RBP8.47□□□□□ -1.05
SDCBP-206ENST00000519115 TAF2Q6P1X5 1199 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 SHC4Q6S5L8 630 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 MTHFD1LQ6UB35 978 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 LRSAM1Q6UWE0 723 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 FSIP1Q8NA03 581 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 FAM167AQ96KS9 214 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 PHF12Q96QT6 1004 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 PPP1R16BQ96T49 567 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 SH2D3AQ9BRG2 576 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 LRRC27Q9C0I9 530 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 NUP62CLQ9H1M0 184 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 TTC12Q9H892 705 aaPredicted RBP8.47□□□□□ -1.05
SDCBP-206ENST00000519115 RGL1Q9NZL6 768 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 CXXC1Q9P0U4 656 aaPredicted RBP8.47□□□□□ -1.05
SDCBP-206ENST00000519115 SEPT9Q9UHD8 586 aaPredicted RBP8.47□□□□□ -1.05
SDCBP-206ENST00000519115 COL1A2P08123 1366 aa8.47□□□□□ -1.05
SDCBP-206ENST00000519115 NR1I2O75469 434 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 C22orf31O95567 290 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 CHRNA1P02708 482 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 PFKMP08237 780 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 CCDC192P0DO97 292 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 LIG1P18858 919 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 KLRC1P26715 233 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 MARCKSP29966 332 aaPredicted RBP8.46□□□□□ -1.06
SDCBP-206ENST00000519115 RFC2P35250 354 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 UBA7P41226 1012 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 CLCN3P51790 818 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 NDUFA8P51970 172 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 CTTNQ14247 550 aaKnown RBP8.46□□□□□ -1.06
SDCBP-206ENST00000519115 TCTN1Q2MV58 587 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 LRIT3Q3SXY7 679 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 MTERF2Q49AM1 385 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 ZNF484Q5JVG2 852 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 HYIQ5T013 277 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 NT5DC1Q5TFE4 455 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 PLA2G4FQ68DD2 849 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 RPUSD2Q8IZ73 545 aaKnown RBP8.46□□□□□ -1.06
SDCBP-206ENST00000519115 LRRC71Q8N4P6 559 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 METTL13Q8N6R0 699 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 TRIML1Q8N9V2 468 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 SPATA20Q8TB22 786 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms