RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 GNG11P61952 73 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 TMF1P82094 1093 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 U2AF1Q01081 240 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 SLC7A5Q01650 507 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 CKAP4Q07065 602 aaKnown RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 NDUFA5Q16718 116 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 PABPC1LQ4VXU2 614 aaKnown RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 ZNF648Q5T619 568 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 ATL3Q6DD88 541 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 PPP4R3AQ6IN85 833 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 KLC3Q6P597 504 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 TRIM65Q6PJ69 517 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 ATF7IPQ6VMQ6 1270 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 NLRP9Q7RTR0 991 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 ANKRD44Q8N8A2 993 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 ANKS4BQ8N8V4 417 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 IGSF22Q8N9C0 903 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 NSUN7Q8NE18 718 aaKnown RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 COG1Q8WTW3 980 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 SLC35B4Q969S0 331 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 FGD4Q96M96 766 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 FRMD6Q96NE9 622 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 NECAB3Q96P71 396 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 CTAGE1Q96RT6 745 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 DUSP23Q9BVJ7 150 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 OSBPL10Q9BXB5 764 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 NAA15Q9BXJ9 866 aaKnown RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 CEP44Q9C0F1 390 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 RSPH9Q9H1X1 276 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 DCTPP1Q9H773 170 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 TMEM165Q9HC07 324 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 NOD2Q9HC29 1040 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 MBNL3Q9NUK0 354 aaKnown RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 HOXC10Q9NYD6 342 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 IL20Q9NYY1 176 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 RABL2AQ9UBK7 228 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 FAM8A1Q9UBU6 413 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 SEL1LQ9UBV2 794 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 ZMAT5Q9UDW3 170 aaKnown RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 CEP131Q9UPN4 1083 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 R3HDM2Q9Y2K5 976 aaKnown RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 ASB3Q9Y575 518 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 MYOM2P54296 1465 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 ATAD2BQ9ULI0 1458 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 SHANK2Q9UPX8 1470 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 RGS12O14924 1447 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 CASKIN1Q8WXD9 1431 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 ST20-MTHFSA0A0A6YYL1 179 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 CTAGE9A4FU28 777 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 FAM25EA8MYX2 175 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 APAF1O14727 1248 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 SKAP2O75563 359 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 RAPGEF3O95398 923 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 ATP6V1G2O95670 118 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 BAG3O95817 575 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 ALOX15P16050 662 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 NME2P22392 152 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 HOXD10P28358 340 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 PPP2R1AP30153 589 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 MLH1P40692 756 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 OXCT1P55809 520 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 TAGLNQ01995 201 aaKnown RBP5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 PRKCQQ04759 706 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 SULT2A1Q06520 285 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 MYO1EQ12965 1108 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 EIF4A2Q14240 407 aaKnown RBP5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 WTAPQ15007 396 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 ARHGEF6Q15052 776 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 CCDC14Q49A88 953 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 BOLA3Q53S33 107 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 ARMC3Q5W041 872 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 MAP1SQ66K74 1059 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 ADALQ6DHV7 355 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 NXNQ6DKJ4 435 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 GRAMD4Q6IC98 578 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 PACS1Q6VY07 963 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 NANOGNBQ7Z5D8 188 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 ZNF554Q86TJ5 538 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 ATG4DQ86TL0 474 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 ARHGEF25Q86VW2 580 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 ARL10Q8N8L6 244 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 DIS3LQ8TF46 1054 aaKnown RBP5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 WDR60Q8WVS4 1066 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 GIMAP1Q8WWP7 306 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 USP6NLQ92738 828 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 NACC2Q96BF6 587 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 RRP36Q96EU6 259 aaKnown RBP5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 EPSTI1Q96J88 318 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 SNX27Q96L92 541 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 IFT74Q96LB3 600 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 FAM161BQ96MY7 647 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 CATSPER2Q96P56 530 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 PRAM1Q96QH2 718 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 NR1H4Q96RI1 486 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 EMILIN2Q9BXX0 1053 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 UPF3BQ9BZI7 483 aaKnown RBP5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 LNPKQ9C0E8 428 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 RPAP3Q9H6T3 665 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 KAT14Q9H8E8 782 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms