RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 NEK9Q8TD19 979 aa23.64■■□□□ 1.37
MTCL1-204ENST00000517554 CEP170P1Q96L14 293 aa23.64■■□□□ 1.37
MTCL1-204ENST00000517554 TTYH1Q9H313 450 aaPredicted RBP23.64■■□□□ 1.37
MTCL1-204ENST00000517554 ADAMTS10Q9H324 1103 aa23.64■■□□□ 1.37
MTCL1-204ENST00000517554 GINS2Q9Y248 185 aa23.64■■□□□ 1.37
MTCL1-204ENST00000517554 SQORQ9Y6N5 450 aa23.64■■□□□ 1.37
MTCL1-204ENST00000517554 CHD9Q3L8U1 2897 aa23.63■■□□□ 1.37
MTCL1-204ENST00000517554 ATP2C1P98194 919 aaPredicted RBP23.63■■□□□ 1.37
MTCL1-204ENST00000517554 RESTQ13127 1097 aa23.63■■□□□ 1.37
MTCL1-204ENST00000517554 ECM1Q16610 540 aa23.63■■□□□ 1.37
MTCL1-204ENST00000517554 BRAPQ7Z569 592 aa23.63■■□□□ 1.37
MTCL1-204ENST00000517554 HERC6Q8IVU3 1022 aa23.63■■□□□ 1.37
MTCL1-204ENST00000517554 PHOSPHO2Q8TCD6 241 aa23.63■■□□□ 1.37
MTCL1-204ENST00000517554 ZNF668Q96K58 619 aaPredicted RBP23.63■■□□□ 1.37
MTCL1-204ENST00000517554 SLC9A7Q96T83 725 aa23.63■■□□□ 1.37
MTCL1-204ENST00000517554 DHX33Q9H6R0 707 aaKnown RBP23.63■■□□□ 1.37
MTCL1-204ENST00000517554 AKT3Q9Y243 479 aa23.63■■□□□ 1.37
MTCL1-204ENST00000517554 NOC2LQ9Y3T9 749 aaKnown RBP23.63■■□□□ 1.37
MTCL1-204ENST00000517554 M0QZ92 97 aa23.62■■□□□ 1.37
MTCL1-204ENST00000517554 NLRP11P59045 1033 aaKnown RBP23.62■■□□□ 1.37
MTCL1-204ENST00000517554 TMEM266Q2M3C6 531 aa23.62■■□□□ 1.37
MTCL1-204ENST00000517554 FAM173BQ6P4H8 233 aa23.62■■□□□ 1.37
MTCL1-204ENST00000517554 PIGOQ8TEQ8 1089 aa23.62■■□□□ 1.37
MTCL1-204ENST00000517554 LINC01599Q8WXQ3 324 aa23.62■■□□□ 1.37
MTCL1-204ENST00000517554 OSMRQ99650 979 aa23.62■■□□□ 1.37
MTCL1-204ENST00000517554 POLR3CQ9BUI4 534 aaPredicted RBP23.62■■□□□ 1.37
MTCL1-204ENST00000517554 PADI3Q9ULW8 664 aa23.62■■□□□ 1.37
MTCL1-204ENST00000517554 LAD1O00515 517 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 TMOD1P28289 359 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 PRPHP41219 470 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 KCNJ6P48051 423 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 RTN4RL1Q86UN2 441 aaPredicted RBP23.61■■□□□ 1.37
MTCL1-204ENST00000517554 APBB2Q92870 758 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 TUFT1Q9NNX1 390 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 BMP2KQ9NSY1 1161 aaPredicted RBP23.61■■□□□ 1.37
MTCL1-204ENST00000517554 CDH23Q9H251 3354 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 PP2D1A8MPX8 630 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 EFCAB14O75071 495 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 RPA1P27694 616 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 GPC3P51654 580 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 CRYBB1P53674 252 aaPredicted RBP23.61■■□□□ 1.37
MTCL1-204ENST00000517554 PDIA5Q14554 519 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 XKR9Q5GH70 373 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 OTUD6AQ7L8S5 288 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 DEFB123Q8N688 67 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 USP38Q8NB14 1042 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 MAP7D2Q96T17 732 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 TMX1Q9H3N1 280 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 XPNPEP1Q9NQW7 623 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 LRWD1Q9UFC0 647 aa23.61■■□□□ 1.37
MTCL1-204ENST00000517554 GBF1Q92538 1859 aa23.6■■□□□ 1.37
MTCL1-204ENST00000517554 MICAL3Q7RTP6 2002 aa23.6■■□□□ 1.37
MTCL1-204ENST00000517554 STX6O43752 255 aa23.6■■□□□ 1.37
MTCL1-204ENST00000517554 CDC25AP30304 524 aa23.6■■□□□ 1.37
MTCL1-204ENST00000517554 POTEGQ6S5H5 508 aa23.6■■□□□ 1.37
MTCL1-204ENST00000517554 TIFAQ96CG3 184 aa23.6■■□□□ 1.37
MTCL1-204ENST00000517554 FAM161BQ96MY7 647 aa23.6■■□□□ 1.37
MTCL1-204ENST00000517554 NKX2-4Q9H2Z4 354 aa23.6■■□□□ 1.37
MTCL1-204ENST00000517554 ERVK-5Q9HDB9 667 aa23.6■■□□□ 1.37
MTCL1-204ENST00000517554 ANKEF1Q9NU02 776 aa23.6■■□□□ 1.37
MTCL1-204ENST00000517554 LOXHD1Q8IVV2 1947 aa23.59■■□□□ 1.37
MTCL1-204ENST00000517554 ENPP3O14638 875 aa23.59■■□□□ 1.37
MTCL1-204ENST00000517554 ARHGEF15O94989 841 aa23.59■■□□□ 1.37
MTCL1-204ENST00000517554 RARRES1P49788 294 aa23.59■■□□□ 1.37
MTCL1-204ENST00000517554 FAM228AQ86W67 206 aa23.59■■□□□ 1.37
MTCL1-204ENST00000517554 KSR1Q8IVT5 923 aa23.59■■□□□ 1.37
MTCL1-204ENST00000517554 SPRYD3Q8NCJ5 442 aa23.59■■□□□ 1.37
MTCL1-204ENST00000517554 MMTAG2Q9BU76 263 aaKnown RBP23.59■■□□□ 1.37
MTCL1-204ENST00000517554 SEMA6BQ9H3T3 888 aa23.59■■□□□ 1.37
MTCL1-204ENST00000517554 MTMR10Q9NXD2 777 aa23.59■■□□□ 1.37
MTCL1-204ENST00000517554 SUCLA2Q9P2R7 463 aaPredicted RBP23.59■■□□□ 1.37
MTCL1-204ENST00000517554 PPME1Q9Y570 386 aa23.59■■□□□ 1.37
MTCL1-204ENST00000517554 PCDHA11Q9Y5I1 949 aa23.59■■□□□ 1.37
MTCL1-204ENST00000517554 GJB5O95377 273 aa23.58■■□□□ 1.37
MTCL1-204ENST00000517554 DTHD1Q6ZMT9 781 aa23.58■■□□□ 1.37
MTCL1-204ENST00000517554 TMEM143Q96AN5 459 aa23.58■■□□□ 1.37
MTCL1-204ENST00000517554 ARID2Q68CP9 1835 aa23.58■■□□□ 1.37
MTCL1-204ENST00000517554 MGEA5O60502 916 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 RPS6KA5O75582 802 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 XRCC6P12956 609 aaKnown RBP eCLIP23.57■■□□□ 1.36
MTCL1-204ENST00000517554 RFC5P40937 340 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 POLGP54098 1239 aaPredicted RBP23.57■■□□□ 1.36
MTCL1-204ENST00000517554 PAK2Q13177 524 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 EMC2Q15006 297 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 SF3A1Q15459 793 aaKnown RBP23.57■■□□□ 1.36
MTCL1-204ENST00000517554 RAB30Q15771 203 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 FAM117BQ6P1L5 589 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 MYOCDQ8IZQ8 938 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 ERMNQ8TAM6 284 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 SLC7A3Q8WY07 619 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 ST3GAL5Q9UNP4 418 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 LCHNA4D1U4 455 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 CSDE1O75534 798 aaKnown RBP23.57■■□□□ 1.36
MTCL1-204ENST00000517554 CCT6AP40227 531 aaKnown RBP23.57■■□□□ 1.36
MTCL1-204ENST00000517554 ZNF697Q5TEC3 545 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 RHPN2Q8IUC4 686 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 TOP1MTQ969P6 601 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 GUCD1Q96NT3 240 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 MSRAQ9UJ68 235 aa23.57■■□□□ 1.36
MTCL1-204ENST00000517554 CLIC4Q9Y696 253 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms