RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 CSPP1Q1MSJ5 1256 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 TRIM60Q495X7 471 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 RINT1Q6NUQ1 792 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 PADI6Q6TGC4 694 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 CCDC73Q6ZRK6 1079 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 ANKRD33Q7Z3H0 272 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 SERINC5Q86VE9 423 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 GRAMD1CQ8IYS0 662 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 LRRC71Q8N4P6 559 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 KCTD17Q8N5Z5 321 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 C7orf31Q8N865 590 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 LARP4BQ92615 738 aaKnown RBP11.02□□□□□ -0.65
CLN8-202ENST00000517514 STAMQ92783 540 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 BMP2KQ9NSY1 1161 aaPredicted RBP11.02□□□□□ -0.65
CLN8-202ENST00000517514 KBTBD4Q9NVX7 518 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 STK17AQ9UEE5 414 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 CCDC39Q9UFE4 941 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 PCDHA2Q9Y5H9 948 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 SCN5AQ14524 2016 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 LTBP2Q14767 1821 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 ARHGEF35A5YM69 484 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 RRN3P2A6NIE6 340 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 USO1O60763 962 aaKnown RBP11.01□□□□□ -0.65
CLN8-202ENST00000517514 SLFN14P0C7P3 912 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 CYP2C9P11712 490 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 TXLNAP40222 546 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 STAT6P42226 847 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 SYKP43405 635 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 CLCN3P51790 818 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 TLE2Q04725 743 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 FAM160A1Q05DH4 1040 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 FAAP100Q0VG06 881 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 DHX8Q14562 1220 aaKnown RBP11.01□□□□□ -0.65
CLN8-202ENST00000517514 FAM47CQ5HY64 1035 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 TRAF7Q6Q0C0 670 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 KRBA2Q6ZNG9 492 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 OTUD6AQ7L8S5 288 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 KIAA0319LQ8IZA0 1049 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 DNAJC19Q96DA6 116 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 CDK5RAP3Q96JB5 506 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 OSBPL7Q9BZF2 842 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 GPRC5CQ9NQ84 441 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 TUBE1Q9UJT0 475 aa11.01□□□□□ -0.65
CLN8-202ENST00000517514 RSPH10B2B2RC85 870 aa11□□□□□ -0.65
CLN8-202ENST00000517514 PQBP1O60828 265 aaKnown RBP11□□□□□ -0.65
CLN8-202ENST00000517514 PRR29P0C7W0 189 aa11□□□□□ -0.65
CLN8-202ENST00000517514 RSPH10BP0C881 870 aa11□□□□□ -0.65
CLN8-202ENST00000517514 GUCY2CP25092 1073 aa11□□□□□ -0.65
CLN8-202ENST00000517514 ARL2P36404 184 aa11□□□□□ -0.65
CLN8-202ENST00000517514 RFC5P40937 340 aa11□□□□□ -0.65
CLN8-202ENST00000517514 GIT2Q14161 759 aa11□□□□□ -0.65
CLN8-202ENST00000517514 EMC2Q15006 297 aa11□□□□□ -0.65
CLN8-202ENST00000517514 PTGISQ16647 500 aa11□□□□□ -0.65
CLN8-202ENST00000517514 EFCAB12Q6NXP0 572 aa11□□□□□ -0.65
CLN8-202ENST00000517514 GPBP1Q86WP2 473 aa11□□□□□ -0.65
CLN8-202ENST00000517514 IQUBQ8NA54 791 aa11□□□□□ -0.65
CLN8-202ENST00000517514 ASAP3Q8TDY4 903 aa11□□□□□ -0.65
CLN8-202ENST00000517514 BSNDQ8WZ55 320 aa11□□□□□ -0.65
CLN8-202ENST00000517514 TMEM143Q96AN5 459 aa11□□□□□ -0.65
CLN8-202ENST00000517514 PAGE5Q96GU1 130 aa11□□□□□ -0.65
CLN8-202ENST00000517514 TOX2Q96NM4 488 aa11□□□□□ -0.65
CLN8-202ENST00000517514 SEZ6LQ9BYH1 1024 aa11□□□□□ -0.65
CLN8-202ENST00000517514 PPME1Q9Y570 386 aa11□□□□□ -0.65
CLN8-202ENST00000517514 SMIM35A0A1B0GVV1 85 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 MAGEB2O15479 319 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 KLRC4O43908 158 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 DGAT1O75907 488 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 SSBP05455 408 aaKnown RBP eCLIP10.99□□□□□ -0.65
CLN8-202ENST00000517514 ITGB8P26012 769 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 CACNB1Q02641 598 aaPredicted RBP10.99□□□□□ -0.65
CLN8-202ENST00000517514 MGAT3Q09327 533 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 TBC1D8BQ0IIM8 1120 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 PTK7Q13308 1070 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 CUL4BQ13620 913 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 GPNMBQ14956 572 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 CNNM4Q6P4Q7 775 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 SV2BQ7L1I2 683 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 MAEAQ7L5Y9 396 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 RPAINQ86UA6 219 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 KSR1Q8IVT5 923 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 RASSF8Q8NHQ8 419 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 DNAJB3Q8WWF6 145 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 VWCEQ96DN2 955 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 C7orf25Q9BPX7 421 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 REEP2Q9BRK0 252 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 TNMDQ9H2S6 317 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 CUEDC2Q9H467 287 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 CDHR5Q9HBB8 845 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 DACT1Q9NYF0 836 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 TBX21Q9UL17 535 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 ATP11BQ9Y2G3 1177 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 UMODL1Q5DID0 1318 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 TET1Q8NFU7 2136 aa10.99□□□□□ -0.65
CLN8-202ENST00000517514 FRMD3A2A2Y4 597 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 TRIM43BA6NCK2 446 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 GOLGA6L4A6NEF3 574 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 SFI1A8K8P3 1242 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 HIP1RO75146 1068 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 GPR32O75388 356 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 VTNP04004 478 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms