RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 POLR3GO15318 223 aaPredicted RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 DDX3YO15523 660 aaKnown RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PPIP5K2O43314 1243 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 RAD51CO43502 376 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 BUB1O43683 1085 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 EVI5O60447 810 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 LRRN2O75325 713 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TACC1O75410 805 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ERLIN1O75477 346 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PALMO75781 387 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ZMYND10O75800 440 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 MTA2O94776 668 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 GFPT2O94808 682 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 SLITRK3O94933 977 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 STBD1O95210 358 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 KIF4AO95239 1232 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 FGFR1OPO95684 399 aaKnown RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 FTCDO95954 541 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 EGFRP00533 1210 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TUBBP07437 444 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 GLI1P08151 1106 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 FAM153BP0C7A2 387 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TRIM49P0CI25 452 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TRIM49CP0CI26 452 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ARP10275 920 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 EPB41P11171 864 aaKnown RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ALAS1P13196 640 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 GAP43P17677 238 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 NMT1P30419 496 aaKnown RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CXCR5P32302 372 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CAP2P40123 477 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 FMO5P49326 533 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 EPHB4P54760 987 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 NCKAP1LP55160 1127 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 WNT7BP56706 349 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TUBB4BP68371 445 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 SETQ01105 290 aaPredicted RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 MYL7Q01449 175 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 RASSF7Q02833 373 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 KIF5AQ12840 1032 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CTTNQ14247 550 aaKnown RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TCEAL1Q15170 157 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ASIC2Q16515 512 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 FAM153CQ494X1 144 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ZC2HC1CQ53FD0 456 aaPredicted RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 UBAP2Q5T6F2 1119 aaKnown RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 SFMBT2Q5VUG0 894 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 LRCH2Q5VUJ6 765 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 SLC39A4Q6P5W5 647 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 FOXR1Q6PIV2 292 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CCNI2Q6ZMN8 369 aaPredicted RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TAS1R3Q7RTX0 852 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 NT5DC3Q86UY8 548 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CPNE8Q86YQ8 564 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ARHGEF19Q8IW93 802 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CD302Q8IX05 232 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 SPICE1Q8N0Z3 855 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 RNF10Q8N5U6 811 aaKnown RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ANKRD13CQ8N6S4 541 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 USP38Q8NB14 1042 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TPCN2Q8NHX9 752 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 NEK9Q8TD19 979 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 SCFD2Q8WU76 684 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 RFFLQ8WZ73 363 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CD101Q93033 1021 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ARHGEF26Q96DR7 871 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 HES6Q96HZ4 224 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 WNK4Q96J92 1243 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 MS4A14Q96JA4 679 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 CCDC42Q96M95 316 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 DRC1Q96MC2 740 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PSMB7Q99436 277 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 LXNQ9BS40 222 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 LRRC1Q9BTT6 524 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 LRRC27Q9C0I9 530 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 TMEM39BQ9GZU3 492 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 GBP3Q9H0R5 595 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 NUCKS1Q9H1E3 243 aaKnown RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ST6GALNAC4Q9H4F1 302 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 MMRN2Q9H8L6 949 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 FAM204AQ9H8W3 233 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ERVK-5Q9HDB9 667 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 EMILIN3Q9NT22 766 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ZNHIT6Q9NWK9 470 aaKnown RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 STIM2Q9P246 746 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 SEL1LQ9UBV2 794 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 FAM153AQ9UHL3 310 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 LCMT1Q9UIC8 334 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 NOCTQ9UK39 431 aaKnown RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ADAM21Q9UKJ8 722 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 NOC2LQ9Y3T9 749 aaKnown RBP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PCDHA3Q9Y5H8 950 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 UBIAD1Q9Y5Z9 338 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 NFS1Q9Y697 457 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 SCN10AQ9Y5Y9 1956 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 ANKRD36A6QL64 1941 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 OBSL1O75147 1896 aa3.56□□□□□ -1.84
SCARNA20.6-201ENST00000517251 PTPRJQ12913 1337 aa3.55□□□□□ -1.84
SCARNA20.6-201ENST00000517251 UMODL1Q5DID0 1318 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms