RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 DEXIO95424 95 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 LDHCP07864 332 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 PDGFRBP09619 1106 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 XBP1P17861 261 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 GPSM2P81274 684 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 NOGQ13253 232 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 SAFBQ15424 915 aaKnown RBP eCLIP9.36□□□□□ -0.91
SFXN1-211ENST00000515736 NTRK3Q16288 839 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 ZC3H12BQ5HYM0 836 aaKnown RBP9.36□□□□□ -0.91
SFXN1-211ENST00000515736 CCDC181Q5TID7 509 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 KIAA1211LQ6NV74 962 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 FAM117BQ6P1L5 589 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 SASS6Q6UVJ0 657 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 DLK2Q6UY11 383 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 CHST3Q7LGC8 479 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 ZNF804AQ7Z570 1209 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 AMOTL1Q8IY63 956 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 LRRC47Q8N1G4 583 aaKnown RBP9.36□□□□□ -0.91
SFXN1-211ENST00000515736 MRPS27Q92552 414 aaKnown RBP9.36□□□□□ -0.91
SFXN1-211ENST00000515736 DCPSQ96C86 337 aaKnown RBP9.36□□□□□ -0.91
SFXN1-211ENST00000515736 NSUN4Q96CB9 384 aaKnown RBP9.36□□□□□ -0.91
SFXN1-211ENST00000515736 HHIPL1Q96JK4 782 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 RNF26Q9BY78 433 aaPredicted RBP9.36□□□□□ -0.91
SFXN1-211ENST00000515736 ZSWIM5Q9P217 1185 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 ABCF2Q9UG63 623 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 ADAM30Q9UKF2 790 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 MYH8P13535 1937 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 ROBO3Q96MS0 1386 aa9.36□□□□□ -0.91
SFXN1-211ENST00000515736 IRS2Q9Y4H2 1338 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 DCDC2CA8MYV0 355 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 FSCN2O14926 492 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 ZNF500O60304 480 aaPredicted RBP9.35□□□□□ -0.91
SFXN1-211ENST00000515736 LIG1P18858 919 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 U2AF2P26368 475 aaKnown RBP eCLIP9.35□□□□□ -0.916e-7■■■□□ 15.9
SFXN1-211ENST00000515736 GYG1P46976 350 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 KIF23Q02241 960 aaPredicted RBP9.35□□□□□ -0.91
SFXN1-211ENST00000515736 GAS6Q14393 721 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 STK38Q15208 465 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 C21orf62-AS1Q17RA5 79 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 KIF4BQ2VIQ3 1234 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 TM4SF20Q53R12 229 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 C20orf204Q6ZNR8 217 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 ELOA2Q8IYF1 753 aaPredicted RBP9.35□□□□□ -0.91
SFXN1-211ENST00000515736 C2orf69Q8N8R5 385 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 LINC00301Q8NCQ3 95 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 DPF2Q92785 391 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 NINJ1Q92982 152 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 WDR89Q96FK6 387 aaPredicted RBP9.35□□□□□ -0.91
SFXN1-211ENST00000515736 PGBD1Q96JS3 809 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 TIGD1Q96MW7 591 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 USP28Q96RU2 1077 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 MAP3K14Q99558 947 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 ALG1Q9BT22 464 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 MCOLN1Q9GZU1 580 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 FOXP1Q9H334 677 aaPredicted RBP9.35□□□□□ -0.91
SFXN1-211ENST00000515736 GBA2Q9HCG7 927 aaPredicted RBP9.35□□□□□ -0.91
SFXN1-211ENST00000515736 STARD13Q9Y3M8 1113 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 PSME4Q14997 1843 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 MYH1P12882 1939 aa9.35□□□□□ -0.91
SFXN1-211ENST00000515736 FAM237AA0A1B0GTK4 181 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 CHURC1-FNTBB4DL54 471 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 ADM5C9JUS6 153 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 SPTLC2O15270 562 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 UFL1O94874 794 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 BAG3O95817 575 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 BMP15O95972 392 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 S100BP04271 92 aaPredicted RBP9.34□□□□□ -0.91
SFXN1-211ENST00000515736 PGRP06401 933 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 ALAS2P22557 587 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 RPS12P25398 132 aaKnown RBP9.34□□□□□ -0.91
SFXN1-211ENST00000515736 MAP2K3P46734 347 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 ME1P48163 572 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 SLC7A5Q01650 507 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 DHX8Q14562 1220 aaKnown RBP9.34□□□□□ -0.91
SFXN1-211ENST00000515736 STX1AQ16623 288 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 ANO1Q5XXA6 986 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.34□□□□□ -0.91
SFXN1-211ENST00000515736 MICU3Q86XE3 530 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 CCAR1Q8IX12 1150 aaKnown RBP9.34□□□□□ -0.91
SFXN1-211ENST00000515736 MFSD3Q96ES6 412 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 NAT10Q9H0A0 1025 aaKnown RBP9.34□□□□□ -0.91
SFXN1-211ENST00000515736 ZNF287Q9HBT7 754 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 JPH1Q9HDC5 661 aaPredicted RBP9.34□□□□□ -0.91
SFXN1-211ENST00000515736 GMPR2Q9P2T1 348 aaKnown RBP9.34□□□□□ -0.91
SFXN1-211ENST00000515736 POLLQ9UGP5 575 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 KLHL3Q9UH77 587 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 ZNF214Q9UL59 606 aaPredicted RBP9.34□□□□□ -0.91
SFXN1-211ENST00000515736 CEP131Q9UPN4 1083 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 ZKSCAN5Q9Y2L8 839 aa9.34□□□□□ -0.91
SFXN1-211ENST00000515736 CCDC163A0A0D9SF12 145 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 PRAMEF27A3QJZ7 478 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 FAM86C2PA6NEL3 165 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 SNRPBP14678 240 aaKnown RBP9.33□□□□□ -0.92
SFXN1-211ENST00000515736 CMA1P23946 247 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 GRK4P32298 578 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 AKAP17AQ02040 695 aaKnown RBP9.33□□□□□ -0.92
SFXN1-211ENST00000515736 MECOMQ03112 1051 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 SLC39A14Q15043 492 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 SEC23AQ15436 765 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 ZC3H12AQ5D1E8 599 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms