RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 GPR32O75388 356 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 MAFO75444 373 aaPredicted RBP14.32□□□□□ -0.12
CLCN3-210ENST00000515420 GJB2P29033 226 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 CD52P31358 61 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 MCM7P33993 719 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 DNM2P50570 870 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 CLCN3P51790 818 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 TAP1Q03518 808 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 TMEM62Q0P6H9 643 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 CUL4AQ13619 759 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 MTERF2Q49AM1 385 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 TTC38Q5R3I4 469 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 OTUD6AQ7L8S5 288 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 SP7Q8TDD2 431 aaPredicted RBP14.32□□□□□ -0.12
CLCN3-210ENST00000515420 MYLIPQ8WY64 445 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 GAS2L1Q99501 681 aaPredicted RBP14.32□□□□□ -0.12
CLCN3-210ENST00000515420 TSPYL2Q9H2G4 693 aaPredicted RBP14.32□□□□□ -0.12
CLCN3-210ENST00000515420 CYP26B1Q9NR63 512 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 PADI3Q9ULW8 664 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 SMC3Q9UQE7 1217 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 AKT3Q9Y243 479 aa14.32□□□□□ -0.12
CLCN3-210ENST00000515420 GPR182O15218 404 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 GAS2O43903 313 aaKnown RBP14.31□□□□□ -0.12
CLCN3-210ENST00000515420 RPS6KA5O75582 802 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 VTNP04004 478 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 OR52Z1P0C646 297 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 FOSL2P15408 326 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 RFC5P40937 340 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 TXKP42681 527 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 KIZQ2M2Z5 673 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 LRRC71Q8N4P6 559 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 HSD17B14Q9BPX1 270 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 EIF2AK1Q9BQI3 630 aaKnown RBP14.31□□□□□ -0.12
CLCN3-210ENST00000515420 TMEM60Q9H2L4 133 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 ADAMTS10Q9H324 1103 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 WRAP73Q9P2S5 460 aaPredicted RBP14.31□□□□□ -0.12
CLCN3-210ENST00000515420 RALGAPA2Q2PPJ7 1873 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 TRANK1O15050 2925 aa14.31□□□□□ -0.12
CLCN3-210ENST00000515420 LAD1O00515 517 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 ENPP3O14638 875 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 SLITRK3O94933 977 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 ATP2B1P20020 1258 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 YWHABP31946 246 aaKnown RBP14.3□□□□□ -0.12
CLCN3-210ENST00000515420 NLRP11P59045 1033 aaKnown RBP14.3□□□□□ -0.12
CLCN3-210ENST00000515420 RILPL1Q5EBL4 403 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 TMCO2Q7Z6W1 182 aaPredicted RBP14.3□□□□□ -0.12
CLCN3-210ENST00000515420 ZNF410Q86VK4 478 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 TMEM40Q8WWA1 233 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 SLC7A3Q8WY07 619 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 DYDC2Q96IM9 177 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 OSMRQ99650 979 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 PRDM12Q9H4Q4 367 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 DHX33Q9H6R0 707 aaKnown RBP14.3□□□□□ -0.12
CLCN3-210ENST00000515420 SUGCTQ9HAC7 445 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 ERVK-5Q9HDB9 667 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 RGL1Q9NZL6 768 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 GINS2Q9Y248 185 aa14.3□□□□□ -0.12
CLCN3-210ENST00000515420 NOC2LQ9Y3T9 749 aaKnown RBP14.3□□□□□ -0.12
CLCN3-210ENST00000515420 NLRC5Q86WI3 1866 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 LCHNA4D1U4 455 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 LINC01553A4QN01 128 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 TMEM150BA6NC51 233 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 H3BQV1 296 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 XRCC6P12956 609 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■■■■■ 34.5
CLCN3-210ENST00000515420 MUTP22033 750 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 EIF4BP23588 611 aaKnown RBP14.29□□□□□ -0.12
CLCN3-210ENST00000515420 GPC3P51654 580 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 CYP4A11Q02928 519 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 ZNF174Q15697 407 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 TMEM266Q2M3C6 531 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 TPH2Q8IWU9 490 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 CRIPAKQ8N1N5 446 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 LINC01599Q8WXQ3 324 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 CEP170P1Q96L14 293 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 SAMD11Q96NU1 681 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 TGS1Q96RS0 853 aaKnown RBP14.29□□□□□ -0.12
CLCN3-210ENST00000515420 YME1L1Q96TA2 773 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 CDHR5Q9HBB8 845 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 RC3H2Q9HBD1 1191 aaKnown RBP14.29□□□□□ -0.12
CLCN3-210ENST00000515420 TUFT1Q9NNX1 390 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 C1orf112Q9NSG2 853 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 ANKEF1Q9NU02 776 aa14.29□□□□□ -0.12
CLCN3-210ENST00000515420 EYSQ5T1H1 3165 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 POTEMA6NI47 508 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 ARHGEF15O94989 841 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 STAG3L1P0CL83 205 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 DARSP14868 501 aaKnown RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 POU3F3P20264 500 aaPredicted RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 PDCP20941 246 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 PRPHP41219 470 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 TOB1P50616 345 aaPredicted RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 FXR2P51116 673 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 COL4A4P53420 1690 aaPredicted RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 POLGP54098 1239 aaPredicted RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 NPEPPSP55786 919 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 ERVK-21P61565 698 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 NFX1Q12986 1120 aaKnown RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 CTTNQ14247 550 aaKnown RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 LARP1BQ659C4 914 aaKnown RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 HAUS3Q68CZ6 603 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms