RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 AOC2O75106 756 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 TOMM70O94826 608 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 EEF1GP26641 437 aaKnown RBP10.1□□□□□ -0.79
CPNE4-213ENST00000515418 MARK3P27448 753 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 PEX3P56589 373 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 UBXN1Q04323 297 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 SPAG1Q07617 926 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 TTLL4Q14679 1199 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 XKR3Q5GH77 459 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 SPECC1LQ69YQ0 1117 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 KCNV1Q6PIU1 500 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 ANKRD20A12PQ8NF67 263 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 NOC3LQ8WTT2 800 aaKnown RBP10.1□□□□□ -0.79
CPNE4-213ENST00000515418 SCFD2Q8WU76 684 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 GLG1Q92896 1179 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 KATNBL1Q9H079 304 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 PDLIM7Q9NR12 457 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 FLRT1Q9NZU1 646 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 BRCA2P51587 3418 aa10.1□□□□□ -0.79
CPNE4-213ENST00000515418 IGSF9BQ9UPX0 1349 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 SLC16A4O15374 487 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 TGFB1I1O43294 461 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 DKC1O60832 514 aaKnown RBP eCLIP10.09□□□□□ -0.79
CPNE4-213ENST00000515418 OATP04181 439 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 PLS3P13797 630 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 CTGFP29279 349 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 PBX1P40424 430 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 TM4SF4P48230 202 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 ADKP55263 362 aaKnown RBP10.09□□□□□ -0.79
CPNE4-213ENST00000515418 FKBP3Q00688 224 aaKnown RBP10.09□□□□□ -0.79
CPNE4-213ENST00000515418 CCL14Q16627 93 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 MIIPQ5JXC2 388 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 MORN1Q5T089 497 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 BSNDQ8WZ55 320 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 TMEM143Q96AN5 459 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 TINF2Q9BSI4 451 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 KIFC3Q9BVG8 833 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 NOC4LQ9BVI4 516 aaKnown RBP10.09□□□□□ -0.79
CPNE4-213ENST00000515418 ZFYVE28Q9HCC9 887 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 XPNPEP1Q9NQW7 623 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 IMPACTQ9P2X3 320 aa10.09□□□□□ -0.79
CPNE4-213ENST00000515418 DIS3Q9Y2L1 958 aaKnown RBP10.09□□□□□ -0.79
CPNE4-213ENST00000515418 CCDC169A6NNP5 214 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 TISP43B9A030 160 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 K7ENM7 598 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 RNF225M0QZC1 329 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-213ENST00000515418 KIF20AO95235 890 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 CYP2B6P20813 491 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 NR2F2P24468 414 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 CASP4P49662 377 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 ARHGAP1Q07960 439 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 TBX2Q13207 712 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-213ENST00000515418 ZNF467Q7Z7K2 595 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-213ENST00000515418 FAM114A1Q8IWE2 563 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 STRA6Q9BX79 667 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 AZI2Q9H6S1 392 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 ZCCHC17Q9NP64 241 aaKnown RBP10.08□□□□□ -0.8
CPNE4-213ENST00000515418 LARSQ9P2J5 1176 aaKnown RBP10.08□□□□□ -0.8
CPNE4-213ENST00000515418 SEL1LQ9UBV2 794 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 TRAF3IP3Q9Y228 551 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 ZMYM2Q9UBW7 1377 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 ARID2Q68CP9 1835 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 LOC102724159A0A0B4J2E5 919 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 PDXKO00764 312 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 ADCY6O43306 1168 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 MSNP26038 577 aaKnown RBP10.08□□□□□ -0.8
CPNE4-213ENST00000515418 NPTX2P47972 431 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 KLK7P49862 253 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 RBL2Q08999 1139 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 TBC1D8BQ0IIM8 1120 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 SREBF2Q12772 1141 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 MAP2K5Q13163 448 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 ACVR2BQ13705 512 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 PWP2Q15269 919 aaKnown RBP10.08□□□□□ -0.8
CPNE4-213ENST00000515418 BMT2Q1RMZ1 405 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 FAM160B1Q5W0V3 765 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 HAUS6Q7Z4H7 955 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 CCDC155Q8N6L0 562 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 AFG1LQ8WV93 481 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 ZBTB10Q96DT7 871 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 DRC1Q96MC2 740 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 CEP89Q96ST8 783 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 ARHGAP39Q9C0H5 1083 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 VTA1Q9NP79 307 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 NRBP2Q9NSY0 501 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 GJD2Q9UKL4 321 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 ZHX1Q9UKY1 873 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-213ENST00000515418 PCDHB13Q9Y5F0 798 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 EVPLQ92817 2033 aa10.08□□□□□ -0.8
CPNE4-213ENST00000515418 RBM47A0AV96 593 aaKnown RBP10.07□□□□□ -0.8
CPNE4-213ENST00000515418 LGALS16A8MUM7 142 aa10.07□□□□□ -0.8
CPNE4-213ENST00000515418 EIF3DO15371 548 aaKnown RBP eCLIP10.07□□□□□ -0.8
CPNE4-213ENST00000515418 DGAT1O75907 488 aa10.07□□□□□ -0.8
CPNE4-213ENST00000515418 FGFR1OPO95684 399 aaKnown RBP10.07□□□□□ -0.8
CPNE4-213ENST00000515418 NR3C1P04150 777 aa10.07□□□□□ -0.8
CPNE4-213ENST00000515418 SKILP12757 684 aa10.07□□□□□ -0.8
CPNE4-213ENST00000515418 SMPD1P17405 629 aa10.07□□□□□ -0.8
CPNE4-213ENST00000515418 CYP2C19P33261 490 aa10.07□□□□□ -0.8
CPNE4-213ENST00000515418 POLGP54098 1239 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-213ENST00000515418 CCDC40Q4G0X9 1142 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms