RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.65■□□□□ 0.58
AP3S1-208ENST00000515066 UNC93B1Q9H1C4 597 aa18.65■□□□□ 0.58
AP3S1-208ENST00000515066 PANK4Q9NVE7 773 aa18.65■□□□□ 0.58
AP3S1-208ENST00000515066 MYL3P08590 195 aa18.64■□□□□ 0.57
AP3S1-208ENST00000515066 INSRRP14616 1297 aa18.64■□□□□ 0.57
AP3S1-208ENST00000515066 MTFR1Q15390 333 aa18.64■□□□□ 0.57
AP3S1-208ENST00000515066 C11orf57Q6ZUT1 292 aaPredicted RBP18.64■□□□□ 0.57
AP3S1-208ENST00000515066 SMYD4Q8IYR2 804 aaPredicted RBP18.64■□□□□ 0.57
AP3S1-208ENST00000515066 KIAA0895Q8NCT3 520 aa18.64■□□□□ 0.57
AP3S1-208ENST00000515066 TRAPPC12Q8WVT3 735 aa18.64■□□□□ 0.57
AP3S1-208ENST00000515066 SPC25Q9HBM1 224 aa18.64■□□□□ 0.57
AP3S1-208ENST00000515066 GPRC5CQ9NQ84 441 aa18.64■□□□□ 0.57
AP3S1-208ENST00000515066 PAK6Q9NQU5 681 aaPredicted RBP18.64■□□□□ 0.57
AP3S1-208ENST00000515066 EXOC1Q9NV70 894 aa18.64■□□□□ 0.57
AP3S1-208ENST00000515066 RMND1Q9NWS8 449 aa18.64■□□□□ 0.57
AP3S1-208ENST00000515066 PCDHA2Q9Y5H9 948 aa18.64■□□□□ 0.57
AP3S1-208ENST00000515066 MKI67P46013 3256 aaKnown RBP18.64■□□□□ 0.57
AP3S1-208ENST00000515066 SFI1A8K8P3 1242 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 SOX10P56693 466 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 STK4Q13043 487 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 EMC2Q15006 297 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 KIAA0753Q2KHM9 967 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 ZNF658Q5TYW1 1059 aaPredicted RBP18.63■□□□□ 0.57
AP3S1-208ENST00000515066 MAEAQ7L5Y9 396 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 CCDC65Q8IXS2 484 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 TIPINQ9BVW5 301 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 FGFBP2Q9BYJ0 223 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 DNAJC25Q9H1X3 360 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 ANO10Q9NW15 660 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 GDAQ9Y2T3 454 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 PPME1Q9Y570 386 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 SIP14410 1827 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 IGKV6-21A0A0C4DH24 114 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 MAFO75444 373 aaPredicted RBP18.63■□□□□ 0.57
AP3S1-208ENST00000515066 CD44P16070 742 aaKnown RBP18.63■□□□□ 0.57
AP3S1-208ENST00000515066 POLGP54098 1239 aaPredicted RBP18.63■□□□□ 0.57
AP3S1-208ENST00000515066 MFSD10Q14728 455 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 ANO6Q4KMQ2 910 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 FBXO46Q6PJ61 603 aaPredicted RBP18.63■□□□□ 0.57
AP3S1-208ENST00000515066 CXCL17Q6UXB2 119 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 SFR1Q86XK3 245 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 GLIS3Q8NEA6 775 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 FIZ1Q96SL8 496 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 ATP6V0A4Q9HBG4 840 aa18.63■□□□□ 0.57
AP3S1-208ENST00000515066 COL1A2P08123 1366 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 KPNA6O60684 536 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 TBCAO75347 108 aaKnown RBP18.62■□□□□ 0.57
AP3S1-208ENST00000515066 C22orf31O95567 290 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 RFC5P40937 340 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 PSEN2P49810 448 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 TBC1D8BQ0IIM8 1120 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 LRRC41Q15345 812 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 KCNA10Q16322 511 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 MCPH1Q8NEM0 835 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 PPP1R13LQ8WUF5 828 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 SLC7A3Q8WY07 619 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 ZBTB10Q96DT7 871 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 TSPY26PQ9H489 355 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 PARVGQ9HBI0 331 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 COL4A3BPQ9Y5P4 624 aa18.62■□□□□ 0.57
AP3S1-208ENST00000515066 FAM13AO94988 1023 aa18.61■□□□□ 0.57
AP3S1-208ENST00000515066 ASGR1P07306 291 aa18.61■□□□□ 0.57
AP3S1-208ENST00000515066 MKRN4PQ13434 485 aaPredicted RBP18.61■□□□□ 0.57
AP3S1-208ENST00000515066 DRP2Q13474 957 aa18.61■□□□□ 0.57
AP3S1-208ENST00000515066 HERC4Q5GLZ8 1057 aaPredicted RBP18.61■□□□□ 0.57
AP3S1-208ENST00000515066 ZNF484Q5JVG2 852 aa18.61■□□□□ 0.57
AP3S1-208ENST00000515066 FAM26FQ5R3K3 315 aa18.61■□□□□ 0.57
AP3S1-208ENST00000515066 MARCH8Q5T0T0 291 aa18.61■□□□□ 0.57
AP3S1-208ENST00000515066 ZHX3Q9H4I2 956 aa18.61■□□□□ 0.57
AP3S1-208ENST00000515066 SLC39A2Q9NP94 309 aa18.61■□□□□ 0.57
AP3S1-208ENST00000515066 OLFML3Q9NRN5 406 aa18.61■□□□□ 0.57
AP3S1-208ENST00000515066 PPP1R3GB7ZBB8 358 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 MYCP01106 439 aaPredicted RBP18.6■□□□□ 0.57
AP3S1-208ENST00000515066 SMIM10L2AP0DMW4 78 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 SMIM10L2BP0DMW5 78 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 CCL5P13501 91 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 GAP43P17677 238 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 HOXC8P31273 242 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 CASP5P51878 434 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 PPFIA1Q13136 1202 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 HIC1Q14526 733 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 GRIK4Q16099 956 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 FAM102BQ5T8I3 360 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 LMBR1Q8WVP7 490 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 BSNDQ8WZ55 320 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 CCDC47Q96A33 483 aaKnown RBP18.6■□□□□ 0.57
AP3S1-208ENST00000515066 ZNF333Q96JL9 665 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 DRC1Q96MC2 740 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 MTG1Q9BT17 334 aaPredicted RBP18.6■□□□□ 0.57
AP3S1-208ENST00000515066 KATNAL1Q9BW62 490 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 TBC1D7Q9P0N9 293 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 PRCPP42785 496 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 IGBP1P78318 339 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 ADAM17P78536 824 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 PSMD2Q13200 908 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 PKN2Q16513 984 aaKnown RBP18.6■□□□□ 0.57
AP3S1-208ENST00000515066 RNF180Q86T96 592 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 LINC01465Q8N7H1 131 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 MLKLQ8NB16 471 aa18.6■□□□□ 0.57
AP3S1-208ENST00000515066 PCSK9Q8NBP7 692 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms