RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SEPT12Q8IYM1 358 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 DEPTORQ8TB45 409 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 ERP27Q96DN0 273 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 MAELQ96JY0 434 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 NRDE2Q9H7Z3 1164 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 VCPKMTQ9H867 229 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 IGSF5Q9NSI5 407 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 PCDHB8Q9UN66 801 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 PPP2R2CQ9Y2T4 447 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 SAMM50Q9Y512 469 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 PCDHB13Q9Y5F0 798 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 AFF2P51816 1311 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 LRRD1A4D1F6 860 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 STX10O60499 249 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 MGEA5O60502 916 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 ALDH3A1P30838 453 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 CCT8P50990 548 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 PMS2P54278 862 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 TUBA1BP68363 451 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 AMPD3Q01432 767 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 SHROOM1Q2M3G4 852 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 TUBA1AQ71U36 451 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 C11orf74Q86VG3 221 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 SMC1BQ8NDV3 1235 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 NEDD1Q8NHV4 660 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 SRPK1Q96SB4 655 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 DESI2Q9BSY9 194 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 SPZ1Q9BXG8 430 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 DISC1Q9NRI5 854 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 GGA1Q9UJY5 639 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 MAFFQ9ULX9 164 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 TMCO1Q9UM00 188 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 CTNND2Q9UQB3 1225 aa8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 ARIH1Q9Y4X5 557 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 ATXN2Q99700 1313 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-219ENST00000514743 SCN9AQ15858 1988 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 TARSL2A2RTX5 802 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 MEFVO15553 781 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 KRT14P02533 472 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 LDHCP07864 332 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 LBRQ14739 615 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 KARSQ15046 597 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 PLCB4Q15147 1175 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 PABPC1LQ4VXU2 614 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 FAM228AQ86W67 206 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 ZNF444Q8N0Y2 327 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 GSDMBQ8TAX9 411 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 CPLX3Q8WVH0 158 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 ZNF653Q96CK0 615 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 EYA3Q99504 573 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 DNAI2Q9GZS0 605 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 ZMYND12Q9H0C1 365 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 GBP3Q9H0R5 595 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 PIDD1Q9HB75 910 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 WDR35Q9P2L0 1181 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 ZNF180Q9UJW8 692 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 STX8Q9UNK0 236 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 C10orf71Q711Q0 1435 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 SGTAO43765 313 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 KLRC4O43908 158 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 TUBB4AP04350 444 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 BLMHQ13867 455 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 MTF1Q14872 753 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 CFAP157Q5JU67 520 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 MFSD14BQ5SR56 506 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 SIX5Q8N196 739 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 RASSF8Q8NHQ8 419 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 CEP95Q96GE4 821 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 CCT7Q99832 543 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 OCEL1Q9H607 264 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 LNPEPQ9UIQ6 1025 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 SH3GLB1Q9Y371 365 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 CCDC151A5D8V7 595 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 IQCA1LA6NCM1 817 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 KLRF2D3W0D1 207 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 PENKP01210 267 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 SLC16A2P36021 539 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 KLC1Q07866 573 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 ZNF658Q5TYW1 1059 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 KRT27Q7Z3Y8 459 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 HEATR3Q7Z4Q2 680 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 RSPH3Q86UC2 560 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 CCDC13Q8IYE1 715 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 ATRIPQ8WXE1 791 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 LZICQ8WZA0 190 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 STAMBPL1Q96FJ0 436 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 IER2Q9BTL4 223 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 OSBPL1AQ9BXW6 950 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 MRPL46Q9H2W6 279 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 ZSWIM4Q9H7M6 989 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 LIMA1Q9UHB6 759 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 RWDD2AQ9UIY3 292 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 GDAQ9Y2T3 454 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 DAGLAQ9Y4D2 1042 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 PARP3Q9Y6F1 533 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 GJA3Q9Y6H8 435 aa8.1□□□□□ -1.11
PDLIM5-219ENST00000514743 hCG_2014768A0A024R1R8 64 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 RPN1P04843 607 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 GYPCP04921 128 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 FECHP22830 423 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms