RNA–Protein interactions for RNA: ENST00000514649.5

TNFRSF8-205, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,412 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-205ENST00000514649 GJB7Q6PEY0 223 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 CACNA2D3Q8IZS8 1091 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 MDM1Q8TC05 714 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 TRIM31Q9BZY9 425 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 PSTPIP2Q9H939 334 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 UTP11Q9Y3A2 253 aaKnown RBP19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 NR2E1Q9Y466 385 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 COL5A3P25940 1745 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 DDX3XO00571 662 aaKnown RBP eCLIP19.71■□□□□ 0.754e-6■□□□□ 11.2
TNFRSF8-205ENST00000514649 RTN2O75298 545 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 XRCC5P13010 732 aaKnown RBP19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 SLC16A2P36021 539 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 IRX1P78414 480 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 EPHA7Q15375 998 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 KRT27Q7Z3Y8 459 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 CPLX4Q7Z7G2 160 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 TATDN2Q93075 761 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 TRIM6Q9C030 488 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 TRAF3IP3Q9Y228 551 aa19.71■□□□□ 0.75
TNFRSF8-205ENST00000514649 POTEFA5A3E0 1075 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 ATP2C2O75185 946 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 AKAP3O75969 853 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 POTEIP0CG38 1075 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 KNOP1Q1ED39 458 aaKnown RBP19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 TCERG1LQ5VWI1 586 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 POTEGQ6S5H5 508 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 POTEEQ6S8J3 1075 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 CEP57Q86XR8 500 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 ZNF526Q8TF50 670 aaPredicted RBP19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 U2AF1L4Q8WU68 220 aaKnown RBP19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 P3H4Q92791 437 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 HES6Q96HZ4 224 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 TRIM51Q9BSJ1 452 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 DHX36Q9H2U1 1008 aaKnown RBP19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 SIX2Q9NPC8 291 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 HAUS2Q9NVX0 235 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 ATP8A1Q9Y2Q0 1164 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 MPHOSPH10O00566 681 aaKnown RBP19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 FGGP02679 453 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 AKR1B1P15121 316 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 PSMC6P62333 389 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 POU5F1Q01860 360 aaKnown RBP19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 GKAP1Q5VSY0 366 aaPredicted RBP19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 PPP1R18Q6NYC8 613 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 FAM228AQ86W67 206 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 SYCE1Q8N0S2 351 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 FAM114A2Q9NRY5 505 aa19.7■□□□□ 0.74
TNFRSF8-205ENST00000514649 PITPNM2Q9BZ72 1349 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 A0A0A6YYK5 440 aaPredicted RBP19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 USP17L15C9J2P7 530 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 USP17L13C9JLJ4 530 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 USP17L11C9JVI0 530 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 USP17L18D6R9N7 530 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 USP17L22D6RA61 530 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 USP17L17D6RBQ6 530 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 USP17L19D6RCP7 530 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 USP17L20D6RJB6 530 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 NEBLO76041 1014 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 SCTRP47872 440 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 CLNS1AP54105 237 aaKnown RBP19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 JAM2P57087 298 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 SLC8A3P57103 927 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 ZNF543Q08ER8 600 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 USP17L24Q0WX57 530 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 MTA1Q13330 715 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 GIT2Q14161 759 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 LACTB2Q53H82 288 aaPredicted RBP19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 CHADLQ6NUI6 762 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 USP17L6PQ6QN14 398 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 VPS36Q86VN1 386 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 OSGEPQ9NPF4 335 aa19.69■□□□□ 0.74
TNFRSF8-205ENST00000514649 USP17L10C9JJH3 530 aa19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 PLCG2P16885 1265 aa19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 PAX7P23759 505 aa19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 GALCP54803 685 aa19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 DPP8Q6V1X1 898 aaPredicted RBP19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 TPX2Q9ULW0 747 aaKnown RBP19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 MEIS1O00470 390 aa19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 DRD4P21917 467 aa19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 RFC4P35249 363 aa19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 CASP4P49662 377 aa19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 SFR1Q86XK3 245 aa19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 ZNF513Q8N8E2 541 aaPredicted RBP19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 CD209Q9NNX6 404 aa19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 AMFRQ9UKV5 643 aa19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 ATF5Q9Y2D1 282 aaPredicted RBP19.68■□□□□ 0.74
TNFRSF8-205ENST00000514649 F8W031 263 aaPredicted RBP19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 CAND2O75155 1236 aa19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 PPFIA2O75334 1257 aa19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 GFPT2O94808 682 aa19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 NPEPPSP55786 919 aa19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 XRCC4Q13426 336 aa19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 ZC3H12AQ5D1E8 599 aaKnown RBP19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 ARMC9Q7Z3E5 817 aa19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 ADAT2Q7Z6V5 191 aaKnown RBP19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 CATSPER3Q86XQ3 398 aa19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 ATP8B4Q8TF62 1192 aa19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 TLCD1Q96CP7 247 aa19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 KCNMB3Q9NPA1 279 aa19.67■□□□□ 0.74
TNFRSF8-205ENST00000514649 GCNT4Q9P109 453 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms