RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ZSCAN22P10073 491 aaPredicted RBP15.58■□□□□ 0.09
USP46-209ENST00000514536 MKRN4PQ13434 485 aaPredicted RBP15.58■□□□□ 0.09
USP46-209ENST00000514536 DRP2Q13474 957 aa15.58■□□□□ 0.09
USP46-209ENST00000514536 PKP1Q13835 747 aa15.58■□□□□ 0.09
USP46-209ENST00000514536 LPIN1Q14693 890 aa15.58■□□□□ 0.09
USP46-209ENST00000514536 PLEKHG4Q58EX7 1191 aa15.58■□□□□ 0.09
USP46-209ENST00000514536 FBXO47Q5MNV8 452 aa15.58■□□□□ 0.09
USP46-209ENST00000514536 HAUS3Q68CZ6 603 aa15.58■□□□□ 0.09
USP46-209ENST00000514536 SNX29Q8TEQ0 813 aa15.58■□□□□ 0.09
USP46-209ENST00000514536 STK24Q9Y6E0 443 aa15.58■□□□□ 0.09
USP46-209ENST00000514536 SLC4A7Q9Y6M7 1214 aa15.58■□□□□ 0.09
USP46-209ENST00000514536 SCN5AQ14524 2016 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 XRCC6P12956 609 aaKnown RBP eCLIP15.58■□□□□ 0.08
USP46-209ENST00000514536 RFC5P40937 340 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 DNM2P50570 870 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 POLGP54098 1239 aaPredicted RBP15.58■□□□□ 0.08
USP46-209ENST00000514536 IKBKEQ14164 716 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 ECM1Q16610 540 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 KIZQ2M2Z5 673 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 KRT79Q5XKE5 535 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 POTEGQ6S5H5 508 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 SLC7A3Q8WY07 619 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 SEPT8Q92599 483 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 ZNF668Q96K58 619 aaPredicted RBP15.58■□□□□ 0.08
USP46-209ENST00000514536 NACC1Q96RE7 527 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 USP28Q96RU2 1077 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 BMP2KQ9NSY1 1161 aaPredicted RBP15.58■□□□□ 0.08
USP46-209ENST00000514536 PPME1Q9Y570 386 aa15.58■□□□□ 0.08
USP46-209ENST00000514536 KDM3AQ9Y4C1 1321 aa15.57■□□□□ 0.08
USP46-209ENST00000514536 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.57■□□□□ 0.08
USP46-209ENST00000514536 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.57■□□□□ 0.08
USP46-209ENST00000514536 GPR32O75388 356 aa15.57■□□□□ 0.08
USP46-209ENST00000514536 F13A1P00488 732 aa15.57■□□□□ 0.08
USP46-209ENST00000514536 RARRES1P49788 294 aa15.57■□□□□ 0.08
USP46-209ENST00000514536 NLRP11P59045 1033 aaKnown RBP15.57■□□□□ 0.08
USP46-209ENST00000514536 PTPAQ15257 358 aa15.57■□□□□ 0.08
USP46-209ENST00000514536 EXOC8Q8IYI6 725 aa15.57■□□□□ 0.08
USP46-209ENST00000514536 TMEM143Q96AN5 459 aa15.57■□□□□ 0.08
USP46-209ENST00000514536 CCDC43Q96MW1 224 aaKnown RBP15.57■□□□□ 0.08
USP46-209ENST00000514536 JPH2Q9BR39 696 aaPredicted RBP15.57■□□□□ 0.08
USP46-209ENST00000514536 MMTAG2Q9BU76 263 aaKnown RBP15.57■□□□□ 0.08
USP46-209ENST00000514536 IFIH1Q9BYX4 1025 aaKnown RBP15.57■□□□□ 0.08
USP46-209ENST00000514536 DHX33Q9H6R0 707 aaKnown RBP15.57■□□□□ 0.08
USP46-209ENST00000514536 AGO3Q9H9G7 860 aaKnown RBP15.57■□□□□ 0.08
USP46-209ENST00000514536 SUCLA2Q9P2R7 463 aaPredicted RBP15.57■□□□□ 0.08
USP46-209ENST00000514536 TFIP11Q9UBB9 837 aaKnown RBP15.57■□□□□ 0.08
USP46-209ENST00000514536 KIAA1024Q9UPX6 916 aa15.57■□□□□ 0.08
USP46-209ENST00000514536 WDR81Q562E7 1941 aa15.56■□□□□ 0.08
USP46-209ENST00000514536 ABHD14A-ACY1A0A1B0GW23 586 aa15.56■□□□□ 0.08
USP46-209ENST00000514536 GRXCR1A8MXD5 290 aa15.56■□□□□ 0.08
USP46-209ENST00000514536 BAIAP3O94812 1187 aa15.56■□□□□ 0.08
USP46-209ENST00000514536 MUTP22033 750 aa15.56■□□□□ 0.08
USP46-209ENST00000514536 MARCKSP29966 332 aaPredicted RBP15.56■□□□□ 0.08
USP46-209ENST00000514536 CRYBB1P53674 252 aaPredicted RBP15.56■□□□□ 0.08
USP46-209ENST00000514536 ZRSR1Q15695 479 aaKnown RBP15.56■□□□□ 0.08
USP46-209ENST00000514536 FOXD4L6Q3SYB3 417 aaPredicted RBP15.56■□□□□ 0.08
USP46-209ENST00000514536 FAM109BQ6ICB4 259 aaPredicted RBP15.56■□□□□ 0.08
USP46-209ENST00000514536 FOXD4L3Q6VB84 417 aaPredicted RBP15.56■□□□□ 0.08
USP46-209ENST00000514536 TSHZ1Q6ZSZ6 1077 aa15.56■□□□□ 0.08
USP46-209ENST00000514536 OSMRQ99650 979 aa15.56■□□□□ 0.08
USP46-209ENST00000514536 ADAMTS10Q9H324 1103 aa15.56■□□□□ 0.08
USP46-209ENST00000514536 DDX19AQ9NUU7 478 aaKnown RBP15.56■□□□□ 0.08
USP46-209ENST00000514536 DBR1Q9UK59 544 aaKnown RBP15.56■□□□□ 0.08
USP46-209ENST00000514536 SQORQ9Y6N5 450 aa15.56■□□□□ 0.08
USP46-209ENST00000514536 TET1Q8NFU7 2136 aa15.56■□□□□ 0.08
USP46-209ENST00000514536 CD52P31358 61 aa15.55■□□□□ 0.08
USP46-209ENST00000514536 GPC3P51654 580 aa15.55■□□□□ 0.08
USP46-209ENST00000514536 GRIN1Q05586 938 aa15.55■□□□□ 0.08
USP46-209ENST00000514536 EMC2Q15006 297 aa15.55■□□□□ 0.08
USP46-209ENST00000514536 GPR153Q6NV75 609 aa15.55■□□□□ 0.08
USP46-209ENST00000514536 RHPN2Q8IUC4 686 aa15.55■□□□□ 0.08
USP46-209ENST00000514536 USP38Q8NB14 1042 aa15.55■□□□□ 0.08
USP46-209ENST00000514536 TMEM40Q8WWA1 233 aa15.55■□□□□ 0.08
USP46-209ENST00000514536 ZNF396Q96N95 335 aaPredicted RBP15.55■□□□□ 0.08
USP46-209ENST00000514536 SCLT1Q96NL6 688 aa15.55■□□□□ 0.08
USP46-209ENST00000514536 DAXXQ9UER7 740 aaPredicted RBP15.55■□□□□ 0.08
USP46-209ENST00000514536 NOC2LQ9Y3T9 749 aaKnown RBP15.55■□□□□ 0.08
USP46-209ENST00000514536 TANC1Q9C0D5 1861 aa15.55■□□□□ 0.08
USP46-209ENST00000514536 ATP2A2P16615 1042 aaKnown RBP15.54■□□□□ 0.08
USP46-209ENST00000514536 KCNJ6P48051 423 aa15.54■□□□□ 0.08
USP46-209ENST00000514536 WDR5P61964 334 aaKnown RBP15.54■□□□□ 0.08
USP46-209ENST00000514536 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.54■□□□□ 0.08
USP46-209ENST00000514536 KSR1Q8IVT5 923 aa15.54■□□□□ 0.08
USP46-209ENST00000514536 ZNF710Q8N1W2 664 aa15.54■□□□□ 0.08
USP46-209ENST00000514536 NLRP7Q8WX94 980 aa15.54■□□□□ 0.08
USP46-209ENST00000514536 APBB2Q92870 758 aa15.54■□□□□ 0.08
USP46-209ENST00000514536 PLIN2Q99541 437 aa15.54■□□□□ 0.08
USP46-209ENST00000514536 MTRQ99707 1265 aa15.54■□□□□ 0.08
USP46-209ENST00000514536 XPNPEP1Q9NQW7 623 aa15.54■□□□□ 0.08
USP46-209ENST00000514536 PADI3Q9ULW8 664 aa15.54■□□□□ 0.08
USP46-209ENST00000514536 EVPLQ92817 2033 aa15.54■□□□□ 0.08
USP46-209ENST00000514536 USO1O60763 962 aaKnown RBP15.53■□□□□ 0.08
USP46-209ENST00000514536 EFCAB14O75071 495 aa15.53■□□□□ 0.08
USP46-209ENST00000514536 RPS6KA5O75582 802 aa15.53■□□□□ 0.08
USP46-209ENST00000514536 DGAT1O75907 488 aa15.53■□□□□ 0.08
USP46-209ENST00000514536 LONP1P36776 959 aaKnown RBP15.53■□□□□ 0.08
USP46-209ENST00000514536 DEFB103AP81534 67 aa15.53■□□□□ 0.08
USP46-209ENST00000514536 SMAD3P84022 425 aaKnown RBP15.53■□□□□ 0.08
USP46-209ENST00000514536 CDC42EP1Q00587 391 aa15.53■□□□□ 0.08
USP46-209ENST00000514536 NFX1Q12986 1120 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms