RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 CELF4Q9BZC1 486 aaKnown RBP16.2■□□□□ 0.18
SNF8-212ENST00000514089 NT5C3AQ9H0P0 336 aa16.2■□□□□ 0.18
SNF8-212ENST00000514089 SUCLA2Q9P2R7 463 aaPredicted RBP16.2■□□□□ 0.18
SNF8-212ENST00000514089 CCDC39Q9UFE4 941 aa16.2■□□□□ 0.18
SNF8-212ENST00000514089 SRPRBQ9Y5M8 271 aaKnown RBP16.2■□□□□ 0.18
SNF8-212ENST00000514089 TRPV2Q9Y5S1 764 aa16.2■□□□□ 0.18
SNF8-212ENST00000514089 KDM3AQ9Y4C1 1321 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 FRMPD3Q5JV73 1810 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 DGAT1O75907 488 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 CHRNA1P02708 482 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 ME1P48163 572 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 DNM1Q05193 864 aaKnown RBP16.19■□□□□ 0.18
SNF8-212ENST00000514089 PTPAQ15257 358 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 MAEAQ7L5Y9 396 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 RHPN2Q8IUC4 686 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 TDHQ8IZJ6 230 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 ZNF579Q8NAF0 562 aaKnown RBP16.19■□□□□ 0.18
SNF8-212ENST00000514089 NLRP7Q8WX94 980 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 MTRQ99707 1265 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 CSRNP2Q9H175 543 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 ATP6V0A4Q9HBG4 840 aa16.19■□□□□ 0.18
SNF8-212ENST00000514089 MYH7BA7E2Y1 1941 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 GAS2O43903 313 aaKnown RBP16.18■□□□□ 0.18
SNF8-212ENST00000514089 YEATS4O95619 227 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 GHRP10912 638 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 NASPP49321 788 aaPredicted RBP16.18■□□□□ 0.18
SNF8-212ENST00000514089 RARRES1P49788 294 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 EPHB4P54760 987 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 NLRP11P59045 1033 aaKnown RBP16.18■□□□□ 0.18
SNF8-212ENST00000514089 KRT85P78386 507 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 IKBKEQ14164 716 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 SHHQ15465 462 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 KIZQ2M2Z5 673 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 FAM26DQ5JW98 314 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 SPECC1Q5M775 1068 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 ODR4Q5SWX8 454 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 LINC00301Q8NCQ3 95 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 KCNG4Q8TDN1 519 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 PSPC1Q8WXF1 523 aaKnown RBP16.18■□□□□ 0.18
SNF8-212ENST00000514089 TMEM143Q96AN5 459 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 CLIC6Q96NY7 704 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.18■□□□□ 0.18
SNF8-212ENST00000514089 BHMT2Q9H2M3 363 aa16.18■□□□□ 0.18
SNF8-212ENST00000514089 DBR1Q9UK59 544 aaKnown RBP16.18■□□□□ 0.18
SNF8-212ENST00000514089 USO1O60763 962 aaKnown RBP16.17■□□□□ 0.18
SNF8-212ENST00000514089 NBNO60934 754 aa16.17■□□□□ 0.18
SNF8-212ENST00000514089 PPP6R2O75170 966 aa16.17■□□□□ 0.18
SNF8-212ENST00000514089 CRYBB1P53674 252 aaPredicted RBP16.17■□□□□ 0.18
SNF8-212ENST00000514089 NFX1Q12986 1120 aaKnown RBP16.17■□□□□ 0.18
SNF8-212ENST00000514089 EMC2Q15006 297 aa16.17■□□□□ 0.18
SNF8-212ENST00000514089 TMEM240Q5SV17 173 aa16.17■□□□□ 0.18
SNF8-212ENST00000514089 FAM102BQ5T8I3 360 aa16.17■□□□□ 0.18
SNF8-212ENST00000514089 PADI6Q6TGC4 694 aa16.17■□□□□ 0.18
SNF8-212ENST00000514089 USP38Q8NB14 1042 aa16.17■□□□□ 0.18
SNF8-212ENST00000514089 ZNF668Q96K58 619 aaPredicted RBP16.17■□□□□ 0.18
SNF8-212ENST00000514089 IFIH1Q9BYX4 1025 aaKnown RBP16.17■□□□□ 0.18
SNF8-212ENST00000514089 GCOM2Q9BZD3 368 aaPredicted RBP16.17■□□□□ 0.18
SNF8-212ENST00000514089 FBXO2Q9UK22 296 aaPredicted RBP16.17■□□□□ 0.18
SNF8-212ENST00000514089 SLC4A7Q9Y6M7 1214 aa16.17■□□□□ 0.18
SNF8-212ENST00000514089 E9PMD0 336 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 ASAP2O43150 1006 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 SLC26A4O43511 780 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 RPS6KA5O75582 802 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 SRGAP2CP0DJJ0 459 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 KCNJ6P48051 423 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 GRIN1Q05586 938 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 PAK2Q13177 524 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 TFDP1Q14186 410 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 ECM1Q16610 540 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 C9orf50Q5SZB4 431 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 CNKSR3Q6P9H4 555 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 C16orf59Q7L2K0 433 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 KCTD17Q8N5Z5 321 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 MCPH1Q8NEM0 835 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 DBF4BQ8NFT6 615 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 PRPF31Q8WWY3 499 aaKnown RBP16.16■□□□□ 0.18
SNF8-212ENST00000514089 APBB2Q92870 758 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 SPATA32Q96LK8 384 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 NLRP4Q96MN2 994 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 OSMRQ99650 979 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 DHX33Q9H6R0 707 aaKnown RBP16.16■□□□□ 0.18
SNF8-212ENST00000514089 ZDHHC9Q9Y397 364 aa16.16■□□□□ 0.18
SNF8-212ENST00000514089 IGKV6-21A0A0C4DH24 114 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 A0A1W2PPC1 479 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 GPR182O15218 404 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 CUTAO60888 179 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 EFCAB14O75071 495 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 EYA4O95677 639 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 MGAT3Q09327 533 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 DRP2Q13474 957 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 DHX8Q14562 1220 aaKnown RBP16.15■□□□□ 0.18
SNF8-212ENST00000514089 MXD4Q14582 209 aaPredicted RBP16.15■□□□□ 0.18
SNF8-212ENST00000514089 LPIN1Q14693 890 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 KARSQ15046 597 aaKnown RBP16.15■□□□□ 0.18
SNF8-212ENST00000514089 TPRNQ4KMQ1 711 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 FBXO47Q5MNV8 452 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 RRAGBQ5VZM2 374 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 TRAF7Q6Q0C0 670 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 TSHZ1Q6ZSZ6 1077 aa16.15■□□□□ 0.18
SNF8-212ENST00000514089 HERVK_113Q902F9 699 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms