RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 SYT2Q8N9I0 419 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-214ENST00000513989 SLC7A3Q8WY07 619 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 LARP4BQ92615 738 aaKnown RBP11.3□□□□□ -0.6
NEDD9-214ENST00000513989 RAD54LQ92698 747 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 PNMA5Q96PV4 448 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 LBHD1Q9BQE6 289 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-214ENST00000513989 TIPINQ9BVW5 301 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 RNPEPQ9H4A4 650 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 PRDM5Q9NQX1 630 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-214ENST00000513989 STARD7Q9NQZ5 370 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 CYP26B1Q9NR63 512 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 KCND2Q9NZV8 630 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 KCNG1Q9UIX4 513 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 TELO2Q9Y4R8 837 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 IGSF9BQ9UPX0 1349 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 A0A0U1RQG5 324 aaPredicted RBP11.29□□□□□ -0.6
NEDD9-214ENST00000513989 C17orf102A2RUQ5 167 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 DLL1O00548 723 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 ZNF862O60290 1169 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 MYL1P05976 194 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 INSRRP14616 1297 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 RFC5P40937 340 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 CDC42EP1Q00587 391 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 TBC1D8BQ0IIM8 1120 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 ITGA7Q13683 1181 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 DHX8Q14562 1220 aaKnown RBP11.29□□□□□ -0.6
NEDD9-214ENST00000513989 ECM1Q16610 540 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 UGCGQ16739 394 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 NBPF20Q3BBV1 942 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 FAM47CQ5HY64 1035 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 PADI6Q6TGC4 694 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 ANO5Q75V66 913 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 TRIM50Q86XT4 487 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 ELOA2Q8IYF1 753 aaPredicted RBP11.29□□□□□ -0.6
NEDD9-214ENST00000513989 FMR1NBQ8N0W7 255 aaPredicted RBP11.29□□□□□ -0.6
NEDD9-214ENST00000513989 KAT2BQ92831 832 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 SYAP1Q96A49 352 aaPredicted RBP11.29□□□□□ -0.6
NEDD9-214ENST00000513989 FAM161BQ96MY7 647 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 BHMT2Q9H2M3 363 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 MYH7BA7E2Y1 1941 aa11.29□□□□□ -0.6
NEDD9-214ENST00000513989 A0A087WWV3 80 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 E9PMD0 336 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 HAS3O00219 553 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 ZBTB39O15060 712 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 KIAA0355O15063 1070 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 GAS2O43903 313 aaKnown RBP11.28□□□□□ -0.6
NEDD9-214ENST00000513989 NR1I2O75469 434 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 DGAT1O75907 488 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 RPLP2P05387 115 aaKnown RBP11.28□□□□□ -0.6
NEDD9-214ENST00000513989 SMIM10L2AP0DMW4 78 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 SMIM10L2BP0DMW5 78 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 ATP4AP20648 1035 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 RARRES1P49788 294 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 POLGP54098 1239 aaPredicted RBP11.28□□□□□ -0.6
NEDD9-214ENST00000513989 PSMC6P62333 389 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 IGBP1P78318 339 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 SNW1Q13573 536 aaKnown RBP11.28□□□□□ -0.6
NEDD9-214ENST00000513989 GRIK4Q16099 956 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 LONRF3Q496Y0 759 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 MTERF2Q49AM1 385 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 KRBA2Q6ZNG9 492 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 ZNF710Q8N1W2 664 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 MCPH1Q8NEM0 835 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 ENGASEQ8NFI3 743 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 TCP11Q8WWU5 503 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 CCDC47Q96A33 483 aaKnown RBP11.28□□□□□ -0.6
NEDD9-214ENST00000513989 PAGE5Q96GU1 130 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 TNMDQ9H2S6 317 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 TTYH1Q9H313 450 aaPredicted RBP11.28□□□□□ -0.6
NEDD9-214ENST00000513989 GOLPH3LQ9H4A5 285 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 DACT1Q9NYF0 836 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 WRAP73Q9P2S5 460 aaPredicted RBP11.28□□□□□ -0.6
NEDD9-214ENST00000513989 PRKAG2Q9UGJ0 569 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 SERTAD1Q9UHV2 236 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 NOD1Q9Y239 953 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 SCN5AQ14524 2016 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 COL1A2P08123 1366 aa11.28□□□□□ -0.6
NEDD9-214ENST00000513989 ARVCFO00192 962 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 PQBP1O60828 265 aaKnown RBP11.27□□□□□ -0.61
NEDD9-214ENST00000513989 MAFO75444 373 aaPredicted RBP11.27□□□□□ -0.61
NEDD9-214ENST00000513989 STBD1O95210 358 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 SMC2O95347 1197 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 CLTBP09497 229 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 LIG1P18858 919 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 CYP11B2P19099 503 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 KLRC1P26715 233 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 SLC12A3P55017 1021 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 NPEPPSP55786 919 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 FAAP100Q0VG06 881 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 MCM6Q14566 821 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 NFKBIBQ15653 356 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 E2F4Q16254 413 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 ANKRD33Q7Z3H0 272 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 RSPH3Q86UC2 560 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 SESTD1Q86VW0 696 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 GPBP1Q86WP2 473 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 METTL13Q8N6R0 699 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 SUGCTQ9HAC7 445 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 ATP6V0A4Q9HBG4 840 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 BLOC1S4Q9NUP1 217 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms