RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 TRIM43Q96BQ3 446 aaPredicted RBP12.63□□□□□ -0.39
HTT-213ENST00000513806 CCDC43Q96MW1 224 aaKnown RBP12.63□□□□□ -0.39
HTT-213ENST00000513806 RUSC1Q9BVN2 902 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 XPNPEP1Q9NQW7 623 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 ANKEF1Q9NU02 776 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 DNM3Q9UQ16 869 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 COL1A2P08123 1366 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 MBLAC1A4D2B0 266 aaPredicted RBP12.62□□□□□ -0.39
HTT-213ENST00000513806 RRN3P2A6NIE6 340 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 DCDC2CA8MYV0 355 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 TLR3O15455 904 aaKnown RBP12.62□□□□□ -0.39
HTT-213ENST00000513806 CLTBP09497 229 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 CAPN2P17655 700 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 LIG1P18858 919 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 CMA1P23946 247 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 CYP2C18P33260 490 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 TXLNAP40222 546 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 THPOP40225 353 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 STAT6P42226 847 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 POLGP54098 1239 aaPredicted RBP12.62□□□□□ -0.39
HTT-213ENST00000513806 SLC12A3P55017 1021 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 CCL23P55773 120 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 EMC2Q15006 297 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 E2F4Q16254 413 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 C1orf53Q5VUE5 145 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 PADI6Q6TGC4 694 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 OTUD6AQ7L8S5 288 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 SERINC5Q86VE9 423 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 LINC01465Q8N7H1 131 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 SCLYQ96I15 445 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 CDHR5Q9HBB8 845 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 TMEM39AQ9NV64 488 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 FAM13BQ9NYF5 915 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 CCDC39Q9UFE4 941 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 SERTAD1Q9UHV2 236 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 DBR1Q9UK59 544 aaKnown RBP12.62□□□□□ -0.39
HTT-213ENST00000513806 PCDHA2Q9Y5H9 948 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
HTT-213ENST00000513806 RSPH10B2B2RC85 870 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 EVI5O60447 810 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 MAFO75444 373 aaPredicted RBP12.61□□□□□ -0.39
HTT-213ENST00000513806 RSPH10BP0C881 870 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 GNAT1P11488 350 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 PTK7Q13308 1070 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 ARSHQ5FYA8 562 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 ZNF618Q5T7W0 954 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 RINT1Q6NUQ1 792 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 KIAA0319LQ8IZA0 1049 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 ASAP3Q8TDY4 903 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 MRPS27Q92552 414 aaKnown RBP12.61□□□□□ -0.39
HTT-213ENST00000513806 MTRQ99707 1265 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 HTATIP2Q9BUP3 242 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 NOC4LQ9BVI4 516 aaKnown RBP12.61□□□□□ -0.39
HTT-213ENST00000513806 NT5C3AQ9H0P0 336 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 WNT8AQ9H1J5 351 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 DHX33Q9H6R0 707 aaKnown RBP12.61□□□□□ -0.39
HTT-213ENST00000513806 TBX21Q9UL17 535 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 KCNH3Q9ULD8 1083 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 AKT3Q9Y243 479 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 GINS2Q9Y248 185 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 HPSEQ9Y251 543 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
HTT-213ENST00000513806 IGKV6-21A0A0C4DH24 114 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 A0A1W2PQ27 194 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 A0A1W2PQ64 194 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 A0A1W2PQD8 194 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 GOLGA6L4A6NEF3 574 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 MYMKA6NI61 221 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 SFI1A8K8P3 1242 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 CSDE1O75534 798 aaKnown RBP12.6□□□□□ -0.39
HTT-213ENST00000513806 CKBP12277 381 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 CYP11B2P19099 503 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 MUTP22033 750 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 AFMP43652 599 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 LONRF3Q496Y0 759 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 FAM102BQ5T8I3 360 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 DYMQ7RTS9 669 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 GPBP1Q86WP2 473 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 SYT2Q8N9I0 419 aaPredicted RBP12.6□□□□□ -0.39
HTT-213ENST00000513806 TMEM87AQ8NBN3 555 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 BSNDQ8WZ55 320 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 LARP4BQ92615 738 aaKnown RBP12.6□□□□□ -0.39
HTT-213ENST00000513806 TOX2Q96NM4 488 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 POLR3FQ9H1D9 316 aaPredicted RBP12.6□□□□□ -0.39
HTT-213ENST00000513806 HIPK3Q9H422 1215 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 ATP6V0A4Q9HBG4 840 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 PDE4DIPQ5VU43 2346 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 CEP290O15078 2479 aa12.6□□□□□ -0.39
HTT-213ENST00000513806 SMIM35A0A1B0GVV1 85 aa12.59□□□□□ -0.39
HTT-213ENST00000513806 ACTN4O43707 911 aaKnown RBP12.59□□□□□ -0.39
HTT-213ENST00000513806 HIP1RO75146 1068 aa12.59□□□□□ -0.39
HTT-213ENST00000513806 CHRNA1P02708 482 aa12.59□□□□□ -0.39
HTT-213ENST00000513806 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
HTT-213ENST00000513806 XRCC6P12956 609 aaKnown RBP eCLIP12.59□□□□□ -0.39
HTT-213ENST00000513806 FGFR4P22455 802 aa12.59□□□□□ -0.39
HTT-213ENST00000513806 RFC5P40937 340 aa12.59□□□□□ -0.39
HTT-213ENST00000513806 SYKP43405 635 aa12.59□□□□□ -0.39
HTT-213ENST00000513806 MBTPS1Q14703 1052 aa12.59□□□□□ -0.39
HTT-213ENST00000513806 KIZQ2M2Z5 673 aa12.59□□□□□ -0.39
HTT-213ENST00000513806 TRAF7Q6Q0C0 670 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms