RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 NCLP19338 710 aaKnown RBP13.76□□□□□ -0.21
SFXN1-210ENST00000513725 STPG1Q5TH74 334 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 METTL7BQ6UX53 244 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 LRRC55Q6ZSA7 311 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 SLC39A11Q8N1S5 342 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
SFXN1-210ENST00000513725 ADAM32Q8TC27 787 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 MYADMQ96S97 322 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 ADAM2Q99965 735 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 FAM49AQ9H0Q0 323 aaPredicted RBP13.76□□□□□ -0.21
SFXN1-210ENST00000513725 WDR6Q9NNW5 1121 aaKnown RBP13.76□□□□□ -0.21
SFXN1-210ENST00000513725 LTB4R2Q9NPC1 389 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 TMEM161AQ9NX61 479 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 WASF3Q9UPY6 502 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 IRAK3Q9Y616 596 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 AKAP13Q12802 2813 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 CLUHO75153 1309 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 MBLAC1A4D2B0 266 aaPredicted RBP13.75□□□□□ -0.21
SFXN1-210ENST00000513725 HOXA2O43364 376 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 RPS9P46781 194 aaKnown RBP13.75□□□□□ -0.21
SFXN1-210ENST00000513725 NEDD9Q14511 834 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 GRIK4Q16099 956 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 SLC44A4Q53GD3 710 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 CYP26C1Q6V0L0 522 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 VPS52Q8N1B4 723 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 CLASRPQ8N2M8 674 aaKnown RBP13.75□□□□□ -0.21
SFXN1-210ENST00000513725 CLDN23Q96B33 292 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 TMEM169Q96HH4 297 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 NELL2Q99435 816 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 PDCD2LQ9BRP1 358 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 ZBP1Q9H171 429 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 EXOC6BQ9Y2D4 811 aa13.75□□□□□ -0.21
SFXN1-210ENST00000513725 C9IYK1 514 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 ANHXE9PGG2 379 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 MGEA5O60502 916 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 LAMP2P13473 410 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 NOVP48745 357 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 NOVA1P51513 510 aaKnown RBP13.74□□□□□ -0.21
SFXN1-210ENST00000513725 GPC5P78333 572 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 ZNF252P-AS1Q0IIN9 211 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 TMEM62Q0P6H9 643 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 HTR4Q13639 388 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 TMEM266Q2M3C6 531 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 ODR4Q5SWX8 454 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 CYFIP1Q7L576 1253 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 VSIG10LQ86VR7 867 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 ABI1Q8IZP0 508 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 AUTS2Q8WXX7 1259 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 GPKOWQ92917 476 aaPredicted RBP eCLIP13.74□□□□□ -0.21
SFXN1-210ENST00000513725 SCNM1Q9BWG6 230 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 CELF4Q9BZC1 486 aaKnown RBP13.74□□□□□ -0.21
SFXN1-210ENST00000513725 NACAP1Q9BZK3 213 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 BCAS3Q9H6U6 928 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 ELAC1Q9H777 363 aaKnown RBP13.74□□□□□ -0.21
SFXN1-210ENST00000513725 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.74□□□□□ -0.21
SFXN1-210ENST00000513725 MRPL11Q9Y3B7 192 aaKnown RBP13.74□□□□□ -0.21
SFXN1-210ENST00000513725 NUMBLQ9Y6R0 609 aa13.74□□□□□ -0.21
SFXN1-210ENST00000513725 CFBP00751 764 aa13.73□□□□□ -0.21
SFXN1-210ENST00000513725 CTSAP10619 480 aa13.73□□□□□ -0.21
SFXN1-210ENST00000513725 PDHBP11177 359 aa13.73□□□□□ -0.21
SFXN1-210ENST00000513725 TOP1P11387 765 aaKnown RBP13.73□□□□□ -0.21
SFXN1-210ENST00000513725 SLFN5Q08AF3 891 aa13.73□□□□□ -0.21
SFXN1-210ENST00000513725 ZNF543Q08ER8 600 aa13.73□□□□□ -0.21
SFXN1-210ENST00000513725 MTAPQ13126 283 aa13.73□□□□□ -0.21
SFXN1-210ENST00000513725 IFNL3Q8IZI9 196 aa13.73□□□□□ -0.21
SFXN1-210ENST00000513725 GLIS3Q8NEA6 775 aa13.73□□□□□ -0.21
SFXN1-210ENST00000513725 CMASQ8NFW8 434 aaPredicted RBP13.73□□□□□ -0.21
SFXN1-210ENST00000513725 CASD1Q96PB1 797 aa13.73□□□□□ -0.21
SFXN1-210ENST00000513725 C1orf115Q9H7X2 142 aa13.73□□□□□ -0.21
SFXN1-210ENST00000513725 PATL2C9JE40 543 aaKnown RBP13.72□□□□□ -0.21
SFXN1-210ENST00000513725 IPO8O15397 1037 aaKnown RBP13.72□□□□□ -0.21
SFXN1-210ENST00000513725 TDGF1P13385 188 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 CD72P21854 359 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 KLRC2P26717 231 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 CCND2P30279 289 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 ALDH7A1P49419 539 aaKnown RBP13.72□□□□□ -0.21
SFXN1-210ENST00000513725 METAP2P50579 478 aaKnown RBP eCLIP13.72□□□□□ -0.21
SFXN1-210ENST00000513725 POLGP54098 1239 aaPredicted RBP13.72□□□□□ -0.21
SFXN1-210ENST00000513725 PFKPQ01813 784 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 PPARAQ07869 468 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 PGM5Q15124 567 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 SF3A2Q15428 464 aaKnown RBP13.72□□□□□ -0.21
SFXN1-210ENST00000513725 GNPTABQ3T906 1256 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 HSP90AB4PQ58FF6 505 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 MARCH8Q5T0T0 291 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 C19orf48Q6RUI8 117 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 RHPN1Q8TCX5 695 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 EMILIN2Q9BXX0 1053 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 RHOBTB2Q9BYZ6 727 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 FAM217BQ9NTX9 383 aaPredicted RBP13.72□□□□□ -0.21
SFXN1-210ENST00000513725 GPSM3Q9Y4H4 160 aa13.72□□□□□ -0.21
SFXN1-210ENST00000513725 KDM3AQ9Y4C1 1321 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 CCDC195A0A1B0GUA6 201 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 GPAA1O43292 621 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 RANBP6O60518 1105 aaKnown RBP13.71□□□□□ -0.21
SFXN1-210ENST00000513725 RPS6KA5O75582 802 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 ATP5JP18859 108 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 TARSP26639 723 aaKnown RBP13.71□□□□□ -0.21
SFXN1-210ENST00000513725 CNR2P34972 360 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 CLCN4P51793 760 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms