RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 NME8Q8N427 588 aa10.33□□□□□ -0.76
CAST-239ENST00000513666 TDRD5Q8NAT2 981 aaKnown RBP10.33□□□□□ -0.76
CAST-239ENST00000513666 FLCNQ8NFG4 579 aa10.33□□□□□ -0.76
CAST-239ENST00000513666 SMARCC2Q8TAQ2 1214 aa10.33□□□□□ -0.76
CAST-239ENST00000513666 CDHR1Q96JP9 859 aa10.33□□□□□ -0.76
CAST-239ENST00000513666 SEMA4AQ9H3S1 761 aa10.33□□□□□ -0.76
CAST-239ENST00000513666 CNNM2Q9H8M5 875 aa10.33□□□□□ -0.76
CAST-239ENST00000513666 ERVK-5Q9HDB9 667 aa10.33□□□□□ -0.76
CAST-239ENST00000513666 LIMD1Q9UGP4 676 aa10.33□□□□□ -0.76
CAST-239ENST00000513666 SMIM35A0A1B0GVV1 85 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 DENND3A2RUS2 1198 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 PI15O43692 258 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 NPR3P17342 541 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 PDE4AP27815 886 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 USP17L6PQ6QN14 398 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 SLC24A5Q71RS6 500 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 TMC7Q7Z402 723 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 DTWD2Q8NBA8 298 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 TNPO1Q92973 898 aaKnown RBP10.32□□□□□ -0.76
CAST-239ENST00000513666 CUL5Q93034 780 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 PCYT2Q99447 389 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 ADAM2Q99965 735 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 RTP3Q9BQQ7 232 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 USTQ9Y2C2 406 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 HCFC2Q9Y5Z7 792 aa10.32□□□□□ -0.76
CAST-239ENST00000513666 CEP250Q9BV73 2442 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 TPRP12270 2363 aaKnown RBP10.31□□□□□ -0.76
CAST-239ENST00000513666 PIK3CDO00329 1044 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 RPS6KA5O75582 802 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 KRT37O76014 449 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 LMNAP02545 664 aaKnown RBP10.31□□□□□ -0.76
CAST-239ENST00000513666 ITGB5P18084 799 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 PPM1AP35813 382 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 PUM1Q14671 1186 aaKnown RBP eCLIP10.31□□□□□ -0.769e-8■■■□□ 17.7
CAST-239ENST00000513666 IMMTQ16891 758 aaKnown RBP10.31□□□□□ -0.76
CAST-239ENST00000513666 ODR4Q5SWX8 454 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 ANKRD45Q5TZF3 282 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 KIAA1841Q6NSI8 718 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 KCNT2Q6UVM3 1135 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 KCNG4Q8TDN1 519 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 TRAPPC12Q8WVT3 735 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 ELAC1Q9H777 363 aaKnown RBP10.31□□□□□ -0.76
CAST-239ENST00000513666 ATP6V0A4Q9HBG4 840 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 TMEM161AQ9NX61 479 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 LHX6Q9UPM6 363 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 NOC2LQ9Y3T9 749 aaKnown RBP10.31□□□□□ -0.76
CAST-239ENST00000513666 DENND4AQ7Z401 1863 aa10.31□□□□□ -0.76
CAST-239ENST00000513666 C2orf71A6NGG8 1288 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 MEIS2O14770 477 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 CLASP2O75122 1294 aaKnown RBP10.3□□□□□ -0.76
CAST-239ENST00000513666 WEE2P0C1S8 567 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 ARP10275 920 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 FGFR1P11362 822 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 SDSP20132 328 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 FAM189BP81408 668 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 KRT17Q04695 432 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 SMC1AQ14683 1233 aaKnown RBP10.3□□□□□ -0.76
CAST-239ENST00000513666 PLCB4Q15147 1175 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 RARS2Q5T160 578 aaKnown RBP10.3□□□□□ -0.76
CAST-239ENST00000513666 MTHFD1LQ6UB35 978 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 LRRC55Q6ZSA7 311 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 CYB5R4Q7L1T6 521 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 KIAA2013Q8IYS2 634 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 MRPL43Q8N983 215 aaKnown RBP10.3□□□□□ -0.76
CAST-239ENST00000513666 RILPL2Q969X0 211 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 ZNF558Q96NG5 402 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 DSCC1Q9BVC3 393 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 TMEM117Q9H0C3 514 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 AZI2Q9H6S1 392 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 CDHR5Q9HBB8 845 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 CYP26B1Q9NR63 512 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 PKD2L1Q9P0L9 805 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 UBIAD1Q9Y5Z9 338 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 FRYLO94915 3013 aa10.3□□□□□ -0.76
CAST-239ENST00000513666 OTOGLQ3ZCN5 2332 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 GPR182O15218 404 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 MAFGO15525 162 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 EOMESO95936 686 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 MTMR1Q13613 665 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 ATAT1Q5SQI0 421 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 PLPPR4Q7Z2D5 763 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 TMEM40Q8WWA1 233 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 CASD1Q96PB1 797 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 JPH1Q9HDC5 661 aaPredicted RBP10.29□□□□□ -0.76
CAST-239ENST00000513666 DZANK1Q9NVP4 752 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 DLL3Q9NYJ7 618 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 SPG21Q9NZD8 308 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 DBR1Q9UK59 544 aaKnown RBP10.29□□□□□ -0.76
CAST-239ENST00000513666 ST3GAL5Q9UNP4 418 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 GINS2Q9Y248 185 aa10.29□□□□□ -0.76
CAST-239ENST00000513666 HOXA2O43364 376 aa10.28□□□□□ -0.76
CAST-239ENST00000513666 PBX3P40426 434 aa10.28□□□□□ -0.76
CAST-239ENST00000513666 TDGQ13569 410 aa10.28□□□□□ -0.76
CAST-239ENST00000513666 DSC3Q14574 896 aa10.28□□□□□ -0.76
CAST-239ENST00000513666 LRRC43Q8N309 656 aa10.28□□□□□ -0.76
CAST-239ENST00000513666 C12orf76Q8N812 135 aaPredicted RBP10.28□□□□□ -0.76
CAST-239ENST00000513666 PIBF1Q8WXW3 757 aa10.28□□□□□ -0.76
CAST-239ENST00000513666 CNTNAP3BQ96NU0 1288 aa10.28□□□□□ -0.76
CAST-239ENST00000513666 CNTNAP3Q9BZ76 1288 aa10.28□□□□□ -0.76
CAST-239ENST00000513666 RNF19AQ9NV58 838 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms