RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 CRYBB1P53674 252 aaPredicted RBP12.51□□□□□ -0.41
DDX41-216ENST00000513562 SART3Q15020 963 aaKnown RBP12.51□□□□□ -0.41
DDX41-216ENST00000513562 UBE2SQ16763 222 aa12.51□□□□□ -0.41
DDX41-216ENST00000513562 RARS2Q5T160 578 aaKnown RBP12.51□□□□□ -0.41
DDX41-216ENST00000513562 PLEKHM2Q8IWE5 1019 aa12.51□□□□□ -0.41
DDX41-216ENST00000513562 SLC39A11Q8N1S5 342 aa12.51□□□□□ -0.41
DDX41-216ENST00000513562 DTWD2Q8NBA8 298 aa12.51□□□□□ -0.41
DDX41-216ENST00000513562 OSMRQ99650 979 aa12.51□□□□□ -0.41
DDX41-216ENST00000513562 SDF4Q9BRK5 362 aa12.51□□□□□ -0.41
DDX41-216ENST00000513562 DZANK1Q9NVP4 752 aa12.51□□□□□ -0.41
DDX41-216ENST00000513562 DBR1Q9UK59 544 aaKnown RBP12.51□□□□□ -0.41
DDX41-216ENST00000513562 WDR87Q6ZQQ6 2873 aa12.51□□□□□ -0.41
DDX41-216ENST00000513562 SPDYE3A6NKU9 549 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 HBP1O60381 514 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 ATG7O95352 703 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 CYP21A2P08686 494 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 ITGB3BPQ13352 177 aaPredicted RBP12.5□□□□□ -0.41
DDX41-216ENST00000513562 KIZQ2M2Z5 673 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 ATAT1Q5SQI0 421 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 DGLUCYQ7Z3D6 616 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 C12orf76Q8N812 135 aaPredicted RBP12.5□□□□□ -0.41
DDX41-216ENST00000513562 RTP3Q9BQQ7 232 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 MXRA8Q9BRK3 442 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 SEMA4AQ9H3S1 761 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 CYP26B1Q9NR63 512 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 PCDHA6Q9UN73 950 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 DUSP12Q9UNI6 340 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 PCDHA8Q9Y5H6 950 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 COL1A2P08123 1366 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 FRYLO94915 3013 aa12.5□□□□□ -0.41
DDX41-216ENST00000513562 ZBTB42B2RXF5 422 aa12.49□□□□□ -0.41
DDX41-216ENST00000513562 GPR32O75388 356 aa12.49□□□□□ -0.41
DDX41-216ENST00000513562 DDAH1O94760 285 aa12.49□□□□□ -0.41
DDX41-216ENST00000513562 LMNAP02545 664 aaKnown RBP12.49□□□□□ -0.41
DDX41-216ENST00000513562 KIF5BP33176 963 aa12.49□□□□□ -0.41
DDX41-216ENST00000513562 TDGQ13569 410 aa12.49□□□□□ -0.41
DDX41-216ENST00000513562 RALYLQ86SE5 291 aaKnown RBP12.49□□□□□ -0.41
DDX41-216ENST00000513562 ABI1Q8IZP0 508 aa12.49□□□□□ -0.41
DDX41-216ENST00000513562 CTCFLQ8NI51 663 aaPredicted RBP12.49□□□□□ -0.41
DDX41-216ENST00000513562 CYP2W1Q8TAV3 490 aa12.49□□□□□ -0.41
DDX41-216ENST00000513562 IGDCC4Q8TDY8 1250 aa12.49□□□□□ -0.41
DDX41-216ENST00000513562 PPP1R16BQ96T49 567 aa12.49□□□□□ -0.41
DDX41-216ENST00000513562 LZTS2Q9BRK4 669 aa12.49□□□□□ -0.41
DDX41-216ENST00000513562 MYL10Q9BUA6 226 aa12.49□□□□□ -0.41
DDX41-216ENST00000513562 TAF6LQ9Y6J9 622 aa12.49□□□□□ -0.41
DDX41-216ENST00000513562 U3KPZ7 1027 aaPredicted RBP12.49□□□□□ -0.41
DDX41-216ENST00000513562 FNDC1Q4ZHG4 1894 aaPredicted RBP12.48□□□□□ -0.41
DDX41-216ENST00000513562 PLEKHA8P1O95397 391 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 C22orf31O95567 290 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 CCNE2O96020 404 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 ANTXR2P58335 489 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 ZNF484Q5JVG2 852 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 CLLU1OSQ5K130 101 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 KANK3Q6NY19 840 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 ECHDC2Q86YB7 292 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 SMC5Q8IY18 1101 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 ZNF654Q8IZM8 581 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 SIX5Q8N196 739 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 SRBD1Q8N5C6 995 aaKnown RBP12.48□□□□□ -0.41
DDX41-216ENST00000513562 NCOA7Q8NI08 942 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 ACSF2Q96CM8 615 aaPredicted RBP12.48□□□□□ -0.41
DDX41-216ENST00000513562 ZBP1Q9H171 429 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 AGO4Q9HCK5 861 aaKnown RBP12.48□□□□□ -0.41
DDX41-216ENST00000513562 IRAK3Q9Y616 596 aa12.48□□□□□ -0.41
DDX41-216ENST00000513562 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.47□□□□□ -0.41
DDX41-216ENST00000513562 E7EWF7 191 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 CXCL14O95715 111 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 VTNP04004 478 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 EPCAMP16422 314 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 CA8P35219 290 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 GNAQP50148 359 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 PUM1Q14671 1186 aaKnown RBP eCLIP12.47□□□□□ -0.41
DDX41-216ENST00000513562 BMS1Q14692 1282 aaKnown RBP12.47□□□□□ -0.41
DDX41-216ENST00000513562 CEP55Q53EZ4 464 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 FAM160B1Q5W0V3 765 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 ABHD15Q6UXT9 468 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 CCDC149Q6ZUS6 474 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 OTOP3Q7RTS5 596 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 CCDC60Q8IWA6 550 aaPredicted RBP12.47□□□□□ -0.41
DDX41-216ENST00000513562 MB21D2Q8IYB1 491 aaPredicted RBP12.47□□□□□ -0.41
DDX41-216ENST00000513562 FEZF2Q8TBJ5 459 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 KCNG4Q8TDN1 519 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 SLC22A17Q8WUG5 538 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 KCNK12Q9HB15 430 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 LY9Q9HBG7 655 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 FBXL21Q9UKT6 434 aa12.47□□□□□ -0.41
DDX41-216ENST00000513562 BACH1O14867 736 aa12.46□□□□□ -0.41
DDX41-216ENST00000513562 CTSAP10619 480 aa12.46□□□□□ -0.41
DDX41-216ENST00000513562 ATP4AP20648 1035 aa12.46□□□□□ -0.41
DDX41-216ENST00000513562 METAP2P50579 478 aaKnown RBP eCLIP12.46□□□□□ -0.413e-6■■■■□ 22.7
DDX41-216ENST00000513562 BCAR1P56945 870 aa12.46□□□□□ -0.41
DDX41-216ENST00000513562 GIT2Q14161 759 aa12.46□□□□□ -0.41
DDX41-216ENST00000513562 B4GALNT3Q6L9W6 998 aa12.46□□□□□ -0.41
DDX41-216ENST00000513562 PDXDC2PQ6P474 469 aa12.46□□□□□ -0.41
DDX41-216ENST00000513562 TMC5Q6UXY8 1006 aa12.46□□□□□ -0.41
DDX41-216ENST00000513562 GPR149Q86SP6 731 aa12.46□□□□□ -0.41
DDX41-216ENST00000513562 ZNF598Q86UK7 904 aaKnown RBP12.46□□□□□ -0.41
DDX41-216ENST00000513562 CABP7Q86V35 215 aa12.46□□□□□ -0.41
DDX41-216ENST00000513562 KIAA2013Q8IYS2 634 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms