RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 STAG1Q8WVM7 1258 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 FERMT2Q96AC1 680 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 FAM83CQ9BQN1 747 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 CLEC4MQ9H2X3 399 aaPredicted RBP8.11□□□□□ -1.11
RFC1-215ENST00000512881 XPNPEP3Q9NQH7 507 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 IL17RBQ9NRM6 502 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 FBXO40Q9UH90 709 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 ISY1Q9ULR0 285 aaKnown RBP8.11□□□□□ -1.11
RFC1-215ENST00000512881 STX8Q9UNK0 236 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 CNPY2Q9Y2B0 182 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 ATP11BQ9Y2G3 1177 aa8.11□□□□□ -1.11
RFC1-215ENST00000512881 PLIN4Q96Q06 1357 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 A0A0D9SFI3 127 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 KIAA1324LA8MWY0 1029 aaPredicted RBP8.1□□□□□ -1.11
RFC1-215ENST00000512881 ORC4O43929 436 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 PLA2G6O60733 806 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 PGK1P00558 417 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 FGRP09769 529 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 HSPD1P10809 573 aaKnown RBP8.1□□□□□ -1.11
RFC1-215ENST00000512881 AKR1A1P14550 325 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 STAT2P52630 851 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 GSTM4Q03013 218 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 IKQ13123 557 aaPredicted RBP8.1□□□□□ -1.11
RFC1-215ENST00000512881 NMIQ13287 307 aaPredicted RBP8.1□□□□□ -1.11
RFC1-215ENST00000512881 ZNF423Q2M1K9 1284 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 LRIT3Q3SXY7 679 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 KIAA0319Q5VV43 1072 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 RCSD1Q6JBY9 416 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 MAMDC4Q6UXC1 1216 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 KCTD1Q719H9 257 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 RNF180Q86T96 592 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 FAM160B2Q86V87 743 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 TDHQ8IZJ6 230 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 EXOC6Q8TAG9 804 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 RILPL2Q969X0 211 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 CITED4Q96RK1 184 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 LBHD1Q9BQE6 289 aaPredicted RBP8.1□□□□□ -1.11
RFC1-215ENST00000512881 HOMER2Q9NSB8 354 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 PRKAG2Q9UGJ0 569 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 FAM184BQ9ULE4 1060 aa8.1□□□□□ -1.11
RFC1-215ENST00000512881 SYNGAP1Q96PV0 1343 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 GAS2O43903 313 aaKnown RBP8.09□□□□□ -1.11
RFC1-215ENST00000512881 CPNE3O75131 537 aaKnown RBP8.09□□□□□ -1.11
RFC1-215ENST00000512881 MED26O95402 600 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 CTSBP07858 339 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 SDSP20132 328 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 NOVP48745 357 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 SNAP25P60880 206 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 NUCB1Q02818 461 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 TLE2Q04725 743 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 ACVR2BQ13705 512 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 SNX17Q15036 470 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 TRIM60Q495X7 471 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 SGO2Q562F6 1265 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 RRP12Q5JTH9 1297 aaKnown RBP8.09□□□□□ -1.11
RFC1-215ENST00000512881 ZNF589Q86UQ0 364 aaPredicted RBP8.09□□□□□ -1.11
RFC1-215ENST00000512881 CHD1LQ86WJ1 897 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 KCNF1Q9H3M0 494 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 ACAD9Q9H845 621 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 TOMM22Q9NS69 142 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 PCMTD2Q9NV79 361 aa8.09□□□□□ -1.11
RFC1-215ENST00000512881 ZHX1Q9UKY1 873 aaPredicted RBP8.09□□□□□ -1.11
RFC1-215ENST00000512881 BAZ2AQ9UIF9 1905 aaKnown RBP8.09□□□□□ -1.11
RFC1-215ENST00000512881 COL6A3P12111 3177 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 ZNF536O15090 1300 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 RLFQ13129 1914 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 TRIM43BA6NCK2 446 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 PRR19A6NJB7 356 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 ADAMTS4O75173 837 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 NEFLP07196 543 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 TOP1P11387 765 aaKnown RBP8.08□□□□□ -1.12
RFC1-215ENST00000512881 ALAS1P13196 640 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 ITPKAP23677 461 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 HAND2P61296 217 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 CNTN2Q02246 1040 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 TKFCQ3LXA3 575 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 CCDC174Q6PII3 467 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 FAM133AQ8N9E0 248 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 KLHDC9Q8NEP7 349 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 DCAF4Q8WV16 495 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 TRIM43Q96BQ3 446 aaPredicted RBP8.08□□□□□ -1.12
RFC1-215ENST00000512881 FGD4Q96M96 766 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 PSMG3-AS1Q96PY0 264 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 TMEM47Q9BQJ4 181 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 TRIM56Q9BRZ2 755 aaKnown RBP8.08□□□□□ -1.12
RFC1-215ENST00000512881 ABHD16BQ9H3Z7 469 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 ZNF576Q9H609 170 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 CYP4F12Q9HCS2 524 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 A1CFQ9NQ94 594 aaKnown RBP8.08□□□□□ -1.12
RFC1-215ENST00000512881 PRDM5Q9NQX1 630 aaPredicted RBP8.08□□□□□ -1.12
RFC1-215ENST00000512881 RNF146Q9NTX7 359 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 TCP11L1Q9NUJ3 509 aa8.08□□□□□ -1.12
RFC1-215ENST00000512881 CCDC171Q6TFL3 1326 aa8.07□□□□□ -1.12
RFC1-215ENST00000512881 A0A1W2PQ45 241 aaPredicted RBP8.07□□□□□ -1.12
RFC1-215ENST00000512881 A0A1W2PQY0 241 aa8.07□□□□□ -1.12
RFC1-215ENST00000512881 EIF1AYO14602 144 aaKnown RBP8.07□□□□□ -1.12
RFC1-215ENST00000512881 DUSP11O75319 330 aaKnown RBP8.07□□□□□ -1.12
RFC1-215ENST00000512881 B3GALT4O96024 378 aa8.07□□□□□ -1.12
RFC1-215ENST00000512881 MAP4P27816 1152 aaKnown RBP8.07□□□□□ -1.12
RFC1-215ENST00000512881 SLC16A2P36021 539 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms