RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 PLA2G4DQ86XP0 818 aa16.48■□□□□ 0.23
LETM1-207ENST00000512669 SUGP1Q8IWZ8 645 aaKnown RBP16.48■□□□□ 0.23
LETM1-207ENST00000512669 CCDC12Q8WUD4 166 aaPredicted RBP16.48■□□□□ 0.23
LETM1-207ENST00000512669 LENG9Q96B70 501 aa16.48■□□□□ 0.23
LETM1-207ENST00000512669 PHF7Q9BWX1 381 aaPredicted RBP16.48■□□□□ 0.23
LETM1-207ENST00000512669 C1orf112Q9NSG2 853 aa16.48■□□□□ 0.23
LETM1-207ENST00000512669 CLEC1BQ9P126 229 aa16.48■□□□□ 0.23
LETM1-207ENST00000512669 PCDHB7Q9Y5E2 793 aa16.48■□□□□ 0.23
LETM1-207ENST00000512669 LOXHD1Q8IVV2 1947 aa16.48■□□□□ 0.23
LETM1-207ENST00000512669 TMEM221A6NGB7 291 aa16.47■□□□□ 0.23
LETM1-207ENST00000512669 M0R296 226 aa16.47■□□□□ 0.23
LETM1-207ENST00000512669 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
LETM1-207ENST00000512669 ATF7P17544 494 aaPredicted RBP16.47■□□□□ 0.23
LETM1-207ENST00000512669 SSRP1Q08945 709 aaKnown RBP16.47■□□□□ 0.23
LETM1-207ENST00000512669 PAN2Q504Q3 1202 aaKnown RBP16.47■□□□□ 0.23
LETM1-207ENST00000512669 SH3GLB2Q9NR46 395 aa16.47■□□□□ 0.23
LETM1-207ENST00000512669 ZDBF2Q9HCK1 2354 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 C5orf42Q9H799 3197 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 CTDNEP1O95476 244 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 ATP4AP20648 1035 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 ANAPC15P60006 121 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 ZXDAP98168 799 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 TMEM62Q0P6H9 643 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 SPOUT1Q5T280 376 aaKnown RBP16.46■□□□□ 0.23
LETM1-207ENST00000512669 FAM160B1Q5W0V3 765 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 MCTP2Q6DN12 878 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 MTHFD1LQ6UB35 978 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 ADGRD2Q7Z7M1 963 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 TRAPPC12Q8WVT3 735 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 PBXIP1Q96AQ6 731 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 IRF2BPLQ9H1B7 796 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 TLE6Q9H808 572 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 TLR9Q9NR96 1032 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 USP15Q9Y4E8 981 aaPredicted RBP16.46■□□□□ 0.23
LETM1-207ENST00000512669 COL1A2P08123 1366 aa16.46■□□□□ 0.23
LETM1-207ENST00000512669 DENND3A2RUS2 1198 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 IPO5O00410 1097 aaKnown RBP16.45■□□□□ 0.22
LETM1-207ENST00000512669 GPR182O15218 404 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 HBP1O60381 514 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 PFKFB2O60825 505 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 RPS6KA5O75582 802 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 DEXIO95424 95 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 AK2P54819 239 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 NLRP5P59047 1200 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 NFX1Q12986 1120 aaKnown RBP16.45■□□□□ 0.22
LETM1-207ENST00000512669 PRR16Q569H4 304 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 SLC24A5Q71RS6 500 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 CCDC60Q8IWA6 550 aaPredicted RBP16.45■□□□□ 0.22
LETM1-207ENST00000512669 TRIM22Q8IYM9 498 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 CCDC148Q8NFR7 591 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 MICAL1Q8TDZ2 1067 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 PCDHA4Q9UN74 947 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 LZTS1Q9Y250 596 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 PLXNA4Q9HCM2 1894 aa16.45■□□□□ 0.22
LETM1-207ENST00000512669 FNDC1Q4ZHG4 1894 aaPredicted RBP16.44■□□□□ 0.22
LETM1-207ENST00000512669 CPLX1O14810 134 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 LARGE1O95461 756 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 GLP2RO95838 553 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 SIGLEC14Q08ET2 396 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 ZNF484Q5JVG2 852 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 RBM23Q86U06 439 aaKnown RBP16.44■□□□□ 0.22
LETM1-207ENST00000512669 FBXL6Q8N531 539 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 BICD2Q8TD16 824 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 ATP8B4Q8TF62 1192 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 GJA10Q969M2 543 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 ZNF577Q9BSK1 485 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 TMX1Q9H3N1 280 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 ERVK-5Q9HDB9 667 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 RGS18Q9NS28 235 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 GJB4Q9NTQ9 266 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 BARX2Q9UMQ3 279 aaPredicted RBP16.44■□□□□ 0.22
LETM1-207ENST00000512669 KCNJ14Q9UNX9 436 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 WDFY4Q6ZS81 3184 aa16.44■□□□□ 0.22
LETM1-207ENST00000512669 TBKBP1A7MCY6 615 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 MSH4O15457 936 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 HOXA2O43364 376 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 FGF18O76093 207 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 LAG3P18627 525 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 DUSP6Q16828 381 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 SWSAP1Q6NVH7 229 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 THNSL1Q8IYQ7 743 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 BLIDQ8IZY5 108 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 ZNF710Q8N1W2 664 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 DAGLBQ8NCG7 672 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 TBCKQ8TEA7 893 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 SUSD6Q92537 303 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 ADAM2Q99965 735 aa16.43■□□□□ 0.22
LETM1-207ENST00000512669 SLKQ9H2G2 1235 aaPredicted RBP16.43■□□□□ 0.22
LETM1-207ENST00000512669 ELAC1Q9H777 363 aaKnown RBP16.43■□□□□ 0.22
LETM1-207ENST00000512669 PUF60Q9UHX1 559 aaKnown RBP16.43■□□□□ 0.22
LETM1-207ENST00000512669 CACNA1HO95180 2353 aa16.42■□□□□ 0.22
LETM1-207ENST00000512669 ZBTB42B2RXF5 422 aa16.42■□□□□ 0.22
LETM1-207ENST00000512669 C9IYK1 514 aa16.42■□□□□ 0.22
LETM1-207ENST00000512669 BACH1O14867 736 aa16.42■□□□□ 0.22
LETM1-207ENST00000512669 FDPSP14324 419 aaKnown RBP16.42■□□□□ 0.22
LETM1-207ENST00000512669 KLRC1P26715 233 aa16.42■□□□□ 0.22
LETM1-207ENST00000512669 USP11P51784 963 aa16.42■□□□□ 0.22
LETM1-207ENST00000512669 NUBP1P53384 320 aa16.42■□□□□ 0.22
LETM1-207ENST00000512669 SETQ01105 290 aaPredicted RBP16.42■□□□□ 0.22
LETM1-207ENST00000512669 ME3Q16798 604 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms