RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 ZBTB33Q86T24 672 aa8.68□□□□□ -1.02
NEK1-208ENST00000512193 RFX6Q8HWS3 928 aa8.68□□□□□ -1.02
NEK1-208ENST00000512193 SMC1BQ8NDV3 1235 aa8.68□□□□□ -1.02
NEK1-208ENST00000512193 CFAP61Q8NHU2 1237 aa8.68□□□□□ -1.02
NEK1-208ENST00000512193 TRIM11Q96F44 468 aa8.68□□□□□ -1.02
NEK1-208ENST00000512193 MRPL47Q9HD33 250 aaKnown RBP8.68□□□□□ -1.02
NEK1-208ENST00000512193 COX16Q9P0S2 106 aa8.68□□□□□ -1.02
NEK1-208ENST00000512193 ZNF233A6NK53 670 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 K7ERI5 159 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 PRELPP51888 382 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 BASP1P80723 227 aaKnown RBP8.67□□□□□ -1.02
NEK1-208ENST00000512193 ZNF543Q08ER8 600 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 SEMA3FQ13275 785 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 PPP2R5AQ15172 486 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 SLC18A3Q16572 532 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 FAM47EQ6ZV65 393 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 PASD1Q8IV76 773 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 RPUSD2Q8IZ73 545 aaKnown RBP8.67□□□□□ -1.02
NEK1-208ENST00000512193 SCYL3Q8IZE3 742 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 EIF2AK1Q9BQI3 630 aaKnown RBP8.67□□□□□ -1.02
NEK1-208ENST00000512193 RBM12Q9NTZ6 932 aaKnown RBP8.67□□□□□ -1.02
NEK1-208ENST00000512193 EHD2Q9NZN4 543 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 ODF2LQ9ULJ1 636 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 CSADQ9Y600 493 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 DIP2AQ14689 1571 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 MIF4GDA9UHW6 222 aaKnown RBP8.67□□□□□ -1.02
NEK1-208ENST00000512193 PODXLO00592 558 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 KRT14P02533 472 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 FLT1P17948 1338 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 SLC9A1P19634 815 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 GUCY2CP25092 1073 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 SCARA5Q6ZMJ2 495 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 ARMC9Q7Z3E5 817 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 ANAPC4Q9UJX5 808 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 DAGLAQ9Y4D2 1042 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 ADGRB2O60241 1585 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 ZRANB2O95218 330 aaKnown RBP eCLIP8.67□□□□□ -1.02
NEK1-208ENST00000512193 USP11P51784 963 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 HDLBPQ00341 1268 aaKnown RBP8.67□□□□□ -1.02
NEK1-208ENST00000512193 ADCY2Q08462 1091 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 GADL1Q6ZQY3 521 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 FAM160B2Q86V87 743 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 SPATA24Q86W54 205 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 SLC17A8Q8NDX2 589 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 ATP6V1G3Q96LB4 118 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 FUT8Q9BYC5 575 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 LACRTQ9GZZ8 138 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 ADAM22Q9P0K1 906 aa8.67□□□□□ -1.02
NEK1-208ENST00000512193 GMNCA6NCL1 334 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 IPO5O00410 1097 aaKnown RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 C21orf2O43822 256 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 PEX19P40855 299 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 CARSP49589 748 aaKnown RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 BEND6Q5SZJ8 279 aaPredicted RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 PODNQ7Z5L7 613 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 RAB3IL1Q8TBN0 382 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 RMDN3Q96TC7 470 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 MYCBPQ99417 103 aaPredicted RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 ADPGKQ9BRR6 497 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 EFCC1Q9HA90 598 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 FHOD1Q9Y613 1164 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 MROH2AA6NES4 1674 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 ABCB11O95342 1321 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 SSU72P8A0A1W2PR75 194 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 PABPN1LA6NDY0 278 aaKnown RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 PSMD14O00487 310 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 SRGAP2CP0DJJ0 459 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 PDHBP11177 359 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 SAT1P21673 171 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 KLRC1P26715 233 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 ZNF449Q6P9G9 518 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 MMS22LQ6ZRQ5 1243 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 SESTD1Q86VW0 696 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 TRIM50Q86XT4 487 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 SAAL1Q96ER3 474 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 C11orf70Q9BRQ4 267 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 INTS2Q9H0H0 1204 aaKnown RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 ACTR5Q9H9F9 607 aaPredicted RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 SEPT10Q9P0V9 454 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 TTC7AQ9ULT0 858 aaPredicted RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 DEPDC5O75140 1603 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 EMSYQ7Z589 1322 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 SYNGAP1Q96PV0 1343 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 ASNSP08243 561 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 UCHL3P15374 230 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 GCKP35557 465 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 MSH2P43246 934 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 VAMP7P51809 220 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 SARNPP82979 210 aaKnown RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 MTMR1Q13613 665 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 RCN2Q14257 317 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 EARS2Q5JPH6 523 aaKnown RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 SRRM1Q8IYB3 904 aaKnown RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 FAM149B1Q96BN6 582 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 CAPN9O14815 690 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 GALCP54803 685 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 PPP2R2AP63151 447 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 SEC23AQ15436 765 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 HP1BP3Q5SSJ5 553 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms