RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 SEL1LQ9UBV2 794 aa15.46■□□□□ 0.06
TRIO-218ENST00000512070 NOVA2Q9UNW9 492 aaKnown RBP15.46■□□□□ 0.06
TRIO-218ENST00000512070 GMNCA6NCL1 334 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 CTIFO43310 598 aaKnown RBP15.45■□□□□ 0.06
TRIO-218ENST00000512070 TTC19Q6DKK2 380 aaPredicted RBP15.45■□□□□ 0.06
TRIO-218ENST00000512070 DDX56Q9NY93 547 aaKnown RBP15.45■□□□□ 0.06
TRIO-218ENST00000512070 ZNF804BA4D1E1 1349 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 OSBPP22059 807 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 AP3B2Q13367 1082 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 SUPT20HL1Q3ZLR7 823 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 GPKOWQ92917 476 aaPredicted RBP eCLIP15.45■□□□□ 0.06
TRIO-218ENST00000512070 LSG1Q9H089 658 aaKnown RBP15.45■□□□□ 0.06
TRIO-218ENST00000512070 RASSF10A6NK89 507 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 FGGP02679 453 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 ZNF827Q17R98 1081 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 FAM160B2Q86V87 743 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 GDAP1Q8TB36 358 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 DCPSQ96C86 337 aaKnown RBP15.45■□□□□ 0.06
TRIO-218ENST00000512070 CFAP36Q96G28 342 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 EMILIN3Q9NT22 766 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 ESRRBO95718 433 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 GTF2IP78347 998 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
TRIO-218ENST00000512070 LINC00301Q8NCQ3 95 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 ACSL3O95573 720 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 GSNP06396 782 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 MRPL28Q13084 256 aaKnown RBP15.45■□□□□ 0.06
TRIO-218ENST00000512070 CAPRIN1Q14444 709 aaKnown RBP15.45■□□□□ 0.06
TRIO-218ENST00000512070 ALKBH5Q6P6C2 394 aaKnown RBP15.45■□□□□ 0.06
TRIO-218ENST00000512070 PI4K2BQ8TCG2 481 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 C16orf96A6NNT2 1141 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 SLITRK6Q9H5Y7 841 aa15.45■□□□□ 0.06
TRIO-218ENST00000512070 CFLARO15519 480 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 GFPT2O94808 682 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 PSMA3P25788 255 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 RECQLP46063 649 aaPredicted RBP15.44■□□□□ 0.06
TRIO-218ENST00000512070 IMPG1Q17R60 797 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 SUFUQ9UMX1 484 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 LMTK3Q96Q04 1460 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 CUL4AQ13619 759 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 C1orf228Q6PIY5 440 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 ANGPTL8Q6UXH0 198 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 LRRC31Q6UY01 552 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRIO-218ENST00000512070 CEP170P1Q96L14 293 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 MFAP3LO75121 409 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 CCDC159P0C7I6 412 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 DHX34Q14147 1143 aaKnown RBP15.44■□□□□ 0.06
TRIO-218ENST00000512070 SERPINB13Q9UIV8 391 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 PLAAQ9Y263 795 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 RNF103-CHMP3A0A140T963 221 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 ERICH1Q86X53 443 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 ATP11CQ8NB49 1132 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 ARMC2Q8NEN0 867 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 WNT8AQ9H1J5 351 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 STK36Q9NRP7 1315 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 GNAT1P11488 350 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 PPP2R2AP63151 447 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 PPP1R18Q6NYC8 613 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 POTEAQ6S8J7 498 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 TEX9Q8N6V9 391 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 DTX3LQ8TDB6 740 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 FAF2Q96CS3 445 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 ACAP3Q96P50 834 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 TOPORSQ9NS56 1045 aaPredicted RBP15.44■□□□□ 0.06
TRIO-218ENST00000512070 SYNJ2BP-COX16A0A087WUM0 186 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 BTDP43251 543 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 ZC3H12BQ5HYM0 836 aaKnown RBP15.44■□□□□ 0.06
TRIO-218ENST00000512070 UHMK1Q8TAS1 419 aaKnown RBP15.44■□□□□ 0.06
TRIO-218ENST00000512070 COX16Q9P0S2 106 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 SEPT3Q9UH03 358 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 LRFN2Q9ULH4 789 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 DPP9Q86TI2 863 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 PNMA3Q9UL41 463 aa15.44■□□□□ 0.06
TRIO-218ENST00000512070 ALKBH8Q96BT7 664 aaKnown RBP15.43■□□□□ 0.06
TRIO-218ENST00000512070 KDM5CP41229 1560 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 BAZ2BQ9UIF8 2168 aaKnown RBP15.43■□□□□ 0.06
TRIO-218ENST00000512070 OCM2P0CE71 109 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 OCMP0CE72 109 aaPredicted RBP15.43■□□□□ 0.06
TRIO-218ENST00000512070 CYP4A11Q02928 519 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 RFX7Q2KHR2 1363 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 TERF2Q15554 542 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 TNIP2Q8NFZ5 429 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 PAGR1Q9BTK6 254 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 A0A0G2JND7 137 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 FAM187AA6NFU0 413 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 K7ERI5 159 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 THEM5Q8N1Q8 247 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 KHDRBS2Q5VWX1 349 aaKnown RBP15.43■□□□□ 0.06
TRIO-218ENST00000512070 PRUNE1Q86TP1 453 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 MTA3Q9BTC8 594 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 PKD2L2Q9NZM6 624 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 ADAM21Q9UKJ8 722 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 ATP10AO60312 1499 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 GSPT1P15170 499 aaKnown RBP15.43■□□□□ 0.06
TRIO-218ENST00000512070 CNGA3Q16281 694 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 RNF219Q5W0B1 726 aaPredicted RBP15.43■□□□□ 0.06
TRIO-218ENST00000512070 TMEM35BQ8NCS4 154 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 CLIC6Q96NY7 704 aa15.43■□□□□ 0.06
TRIO-218ENST00000512070 IRAK4Q9NWZ3 460 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms