RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 TARBP2Q15633 366 aaKnown RBP18.53■□□□□ 0.56
DDX41-213ENST00000512027 XKR3Q5GH77 459 aa18.53■□□□□ 0.56
DDX41-213ENST00000512027 FAM184AQ8NB25 1140 aa18.53■□□□□ 0.56
DDX41-213ENST00000512027 GDPD5Q8WTR4 605 aa18.53■□□□□ 0.56
DDX41-213ENST00000512027 CEP89Q96ST8 783 aa18.53■□□□□ 0.56
DDX41-213ENST00000512027 C17orf80Q9BSJ5 609 aa18.53■□□□□ 0.56
DDX41-213ENST00000512027 RGL1Q9NZL6 768 aa18.53■□□□□ 0.56
DDX41-213ENST00000512027 INSL6Q9Y581 213 aa18.53■□□□□ 0.56
DDX41-213ENST00000512027 PRRC2BQ5JSZ5 2229 aaKnown RBP18.53■□□□□ 0.56
DDX41-213ENST00000512027 MAGEB2O15479 319 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 MGEA5O60502 916 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 GPR32O75388 356 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 PSMC5P62195 406 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 CYP4A11Q02928 519 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 TBC1D8BQ0IIM8 1120 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 NFX1Q12986 1120 aaKnown RBP18.52■□□□□ 0.56
DDX41-213ENST00000512027 SAFBQ15424 915 aaKnown RBP eCLIP18.52■□□□□ 0.56
DDX41-213ENST00000512027 CALCRLQ16602 461 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 ANO5Q75V66 913 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 ZNF579Q8NAF0 562 aaKnown RBP18.52■□□□□ 0.56
DDX41-213ENST00000512027 FBXO18Q8NFZ0 1043 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 DYDC2Q96IM9 177 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 TMX3Q96JJ7 454 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 YME1L1Q96TA2 773 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 TMEM60Q9H2L4 133 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 ERVK-5Q9HDB9 667 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 SQORQ9Y6N5 450 aa18.52■□□□□ 0.56
DDX41-213ENST00000512027 NEMFO60524 1076 aa18.51■□□□□ 0.55
DDX41-213ENST00000512027 RPS6KA5O75582 802 aa18.51■□□□□ 0.55
DDX41-213ENST00000512027 BAG4O95429 457 aaKnown RBP18.51■□□□□ 0.55
DDX41-213ENST00000512027 MCM7P33993 719 aa18.51■□□□□ 0.55
DDX41-213ENST00000512027 QARSP47897 775 aaKnown RBP18.51■□□□□ 0.55
DDX41-213ENST00000512027 NPEPPSP55786 919 aa18.51■□□□□ 0.55
DDX41-213ENST00000512027 NLRP11P59045 1033 aaKnown RBP18.51■□□□□ 0.55
DDX41-213ENST00000512027 GRB10Q13322 594 aa18.51■□□□□ 0.55
DDX41-213ENST00000512027 CTTNQ14247 550 aaKnown RBP18.51■□□□□ 0.55
DDX41-213ENST00000512027 FAM228AQ86W67 206 aa18.51■□□□□ 0.55
DDX41-213ENST00000512027 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.51■□□□□ 0.55
DDX41-213ENST00000512027 SLFN12Q8IYM2 578 aa18.51■□□□□ 0.55
DDX41-213ENST00000512027 SP7Q8TDD2 431 aaPredicted RBP18.51■□□□□ 0.55
DDX41-213ENST00000512027 TGS1Q96RS0 853 aaKnown RBP18.51■□□□□ 0.55
DDX41-213ENST00000512027 MAP7D2Q96T17 732 aa18.51■□□□□ 0.55
DDX41-213ENST00000512027 LXNQ9BS40 222 aa18.51■□□□□ 0.55
DDX41-213ENST00000512027 NIFKQ9BYG3 293 aaKnown RBP18.51■□□□□ 0.55
DDX41-213ENST00000512027 BMP2KQ9NSY1 1161 aaPredicted RBP18.51■□□□□ 0.55
DDX41-213ENST00000512027 RALGAPA2Q2PPJ7 1873 aa18.51■□□□□ 0.55
DDX41-213ENST00000512027 SPTBN5Q9NRC6 3674 aaKnown RBP18.5■□□□□ 0.55
DDX41-213ENST00000512027 ZBTB39O15060 712 aa18.5■□□□□ 0.55
DDX41-213ENST00000512027 LPXNO60711 386 aa18.5■□□□□ 0.55
DDX41-213ENST00000512027 TXKP42681 527 aa18.5■□□□□ 0.55
DDX41-213ENST00000512027 ERVK-21P61565 698 aa18.5■□□□□ 0.55
DDX41-213ENST00000512027 NBR1Q14596 966 aa18.5■□□□□ 0.55
DDX41-213ENST00000512027 EPHA7Q15375 998 aa18.5■□□□□ 0.55
DDX41-213ENST00000512027 ADAMTS10Q9H324 1103 aa18.5■□□□□ 0.55
DDX41-213ENST00000512027 ST3GAL5Q9UNP4 418 aa18.5■□□□□ 0.55
DDX41-213ENST00000512027 ATG2AQ2TAZ0 1938 aa18.49■□□□□ 0.55
DDX41-213ENST00000512027 POTEMA6NI47 508 aa18.49■□□□□ 0.55
DDX41-213ENST00000512027 CSDE1O75534 798 aaKnown RBP18.49■□□□□ 0.55
DDX41-213ENST00000512027 P4HBP07237 508 aaKnown RBP18.49■□□□□ 0.55
DDX41-213ENST00000512027 FGFR4P22455 802 aa18.49■□□□□ 0.55
DDX41-213ENST00000512027 TMOD1P28289 359 aa18.49■□□□□ 0.55
DDX41-213ENST00000512027 GATMP50440 423 aa18.49■□□□□ 0.55
DDX41-213ENST00000512027 GPC3P51654 580 aa18.49■□□□□ 0.55
DDX41-213ENST00000512027 CRYBB1P53674 252 aaPredicted RBP18.49■□□□□ 0.55
DDX41-213ENST00000512027 GNL2Q13823 731 aaKnown RBP18.49■□□□□ 0.55
DDX41-213ENST00000512027 ZNF174Q15697 407 aa18.49■□□□□ 0.55
DDX41-213ENST00000512027 MTMR9Q96QG7 549 aa18.49■□□□□ 0.55
DDX41-213ENST00000512027 TSPYL2Q9H2G4 693 aaPredicted RBP18.49■□□□□ 0.55
DDX41-213ENST00000512027 TTC12Q9H892 705 aaPredicted RBP18.49■□□□□ 0.55
DDX41-213ENST00000512027 RC3H2Q9HBD1 1191 aaKnown RBP18.49■□□□□ 0.55
DDX41-213ENST00000512027 PCDHA12Q9UN75 941 aa18.49■□□□□ 0.55
DDX41-213ENST00000512027 MTCH2Q9Y6C9 303 aa18.49■□□□□ 0.55
DDX41-213ENST00000512027 FNDC1Q4ZHG4 1894 aaPredicted RBP18.48■□□□□ 0.55
DDX41-213ENST00000512027 IGKV6-21A0A0C4DH24 114 aa18.48■□□□□ 0.55
DDX41-213ENST00000512027 NOSTRINQ8IVI9 506 aa18.48■□□□□ 0.55
DDX41-213ENST00000512027 SCLT1Q96NL6 688 aa18.48■□□□□ 0.55
DDX41-213ENST00000512027 EIF2AK1Q9BQI3 630 aaKnown RBP18.48■□□□□ 0.55
DDX41-213ENST00000512027 FTHL17Q9BXU8 183 aa18.48■□□□□ 0.55
DDX41-213ENST00000512027 FOXP1Q9H334 677 aaPredicted RBP18.48■□□□□ 0.55
DDX41-213ENST00000512027 CYP26B1Q9NR63 512 aa18.48■□□□□ 0.55
DDX41-213ENST00000512027 ADGRA3Q8IWK6 1321 aa18.48■□□□□ 0.55
DDX41-213ENST00000512027 A0A087WWV3 80 aa18.47■□□□□ 0.55
DDX41-213ENST00000512027 MAFO75444 373 aaPredicted RBP18.47■□□□□ 0.55
DDX41-213ENST00000512027 KSR1Q8IVT5 923 aa18.47■□□□□ 0.55
DDX41-213ENST00000512027 TPH2Q8IWU9 490 aa18.47■□□□□ 0.55
DDX41-213ENST00000512027 CRIPAKQ8N1N5 446 aa18.47■□□□□ 0.55
DDX41-213ENST00000512027 FBXO22Q8NEZ5 403 aa18.47■□□□□ 0.55
DDX41-213ENST00000512027 NLRP7Q8WX94 980 aa18.47■□□□□ 0.55
DDX41-213ENST00000512027 CEP170P1Q96L14 293 aa18.47■□□□□ 0.55
DDX41-213ENST00000512027 ADAM2Q99965 735 aa18.47■□□□□ 0.55
DDX41-213ENST00000512027 DENND3A2RUS2 1198 aa18.46■□□□□ 0.55
DDX41-213ENST00000512027 SLITRK3O94933 977 aa18.46■□□□□ 0.55
DDX41-213ENST00000512027 GJB2P29033 226 aa18.46■□□□□ 0.55
DDX41-213ENST00000512027 YWHABP31946 246 aaKnown RBP18.46■□□□□ 0.55
DDX41-213ENST00000512027 PAN2Q504Q3 1202 aaKnown RBP18.46■□□□□ 0.55
DDX41-213ENST00000512027 EPC2Q52LR7 807 aa18.46■□□□□ 0.55
DDX41-213ENST00000512027 TTC38Q5R3I4 469 aa18.46■□□□□ 0.55
DDX41-213ENST00000512027 NPAS4Q8IUM7 802 aa18.46■□□□□ 0.55
DDX41-213ENST00000512027 C4orf19Q8IY42 314 aa18.46■□□□□ 0.55
DDX41-213ENST00000512027 FIBCD1Q8N539 461 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms